Transcript Information: R_Transcript_392041.p1


Annotated TAIR IDAT5G17700.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5831025-5833415 | Reverse length=497
E-Value9E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1062400578617
Replicate 20.38175091665997
Replicate 30.69414356351977
Condition 2: 8 Hour
Replicate 10.29679836299691
Replicate 20.54208198402874
Replicate 31.3201171360281
Condition 3: 24 Hour
Replicate 12.0870733843367
Replicate 20.66834117850234
Replicate 31.0612220454253


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_392041.p1 GENE.R_Transcript_392041~~R_Transcript_392041.p1 ORF type:internal len:165 (+),score=35.65,MatE|PF01554.14|8.6e-11 R_Transcript_392041:3-494(+)
CTGTTTCTCATTTTGAAAATCATCAAATGGAAGAGCAGCAGGCTGCTCAAGTACAATTATGTACCTCTTGCACTTCTGAAGCGCCACACTTTCAAATACCCTTCTTTTCTTATGAAAATGGATCTGGGGCCAGAAGCAAGGCTTCTTGTATCTCAAGATGATAAGGTTGAGGACTTGAAGAGAAGGCTATGGGAAGAATCGGAAAGGGCATGGGCAATAGCGTTCCCATCGATGGTGTGCCGTGTGACAACTTATGGAGCATATGTGGTTTCACAATCCTCTTTTGGATATCGTAGTGAAGTGGACCTTGCAGCATATGCTCTTGTCCAAACAACACTTGTGCGGTTTTCAAATGGTATCTTGCTAGGAATGTCTAGTGTAACTGAGACACTATGTGGAGAAGCATTTGGAGCCAAGCAATTTGACATGATGGGAGTGAACTTGCAAAGGTCCTGGATTGTAAATACTGCTGCAGCTACAGCCATGGTGCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_392041.p1 GENE.R_Transcript_392041~~R_Transcript_392041.p1 ORF type:internal len:165 (+),score=35.65,MatE|PF01554.14|8.6e-11 R_Transcript_392041:3-494(+)
LFLILKIIKWKSSRLLKYNYVPLALLKRHTFKYPSFLMKMDLGPEARLLVSQDDKVEDLKRRLWEESERAWAIAFPSMVCRVTTYGAYVVSQSSFGYRSEVDLAAYALVQTTLVRFSNGILLGMSSVTETLCGEAFGAKQFDMMGVNLQRSWIVNTAAATAMVP

Click here to download the sequence:
Link to NCBI Protein BLAST