Transcript Information: R_Transcript_392045.p1


Annotated TAIR IDAT5G17700.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5831025-5833415 | Reverse length=497
E-Value5E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.68620153965108
Replicate 20.78933460211647
Replicate 30.17223110974551
Condition 2: 8 Hour
Replicate 10.73641699089459
Replicate 21.1768885179571
Replicate 30.54591310136502
Condition 3: 24 Hour
Replicate 10.86307545968812
Replicate 20.33165802842973
Replicate 30.32913841634432


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_392045.p1 GENE.R_Transcript_392045~~R_Transcript_392045.p1 ORF type:3prime_partial len:133 (+),score=27.72,MatE|PF01554.14|4.8e-12 R_Transcript_392045:841-1236(+)
ATGAATCATGAATTGCAGACAATGTATCCGGGCCCAGAAGCAAGGCTTCTTGTATCTCAAGATGATAAGGTTGAGGACTTTAAGAAAAGGCTATGGGAAGAATTGAAAAGGTTATGGGCAATAGCATTCCCATCAATGGTGTGCCGTGTGACAACTTATGGAGCATATGTGGTTTCACAATCCTCTTTTGGGTATCTTAGTGAAGTGGACCTTGCAGCGTACGCTCTTGTCCAAACAATACTTGTGCGGTTTTCAAATGGTATCTTGCTAGGAATGTCTAGTGTAACTGAGACACTATGTGGAGAAGCATTTGGAGCCAAGCAATTTGACATGATGGGAGTGAACTTGCAAAGGTCCTGGATTGTAAATACTGCTGCAGCTACAGCCATGGTGCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_392045.p1 GENE.R_Transcript_392045~~R_Transcript_392045.p1 ORF type:3prime_partial len:133 (+),score=27.72,MatE|PF01554.14|4.8e-12 R_Transcript_392045:841-1236(+)
MNHELQTMYPGPEARLLVSQDDKVEDFKKRLWEELKRLWAIAFPSMVCRVTTYGAYVVSQSSFGYLSEVDLAAYALVQTILVRFSNGILLGMSSVTETLCGEAFGAKQFDMMGVNLQRSWIVNTAAATAMVP

Click here to download the sequence:
Link to NCBI Protein BLAST