Transcript Information: R_Transcript_39210.p1


Annotated TAIR IDAT1G19100.1
Annotated Gene NameHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:6595560-6601159 | Forward length=663
E-Value9E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0214601858621
Replicate 22.5442273454266
Replicate 33.2243265894217
Condition 2: 8 Hour
Replicate 14.1658937915142
Replicate 23.5032960534538
Replicate 34.5545657003419
Condition 3: 24 Hour
Replicate 14.6927219180252
Replicate 23.0774779847317
Replicate 35.170534889316


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39210.p1 GENE.R_Transcript_39210~~R_Transcript_39210.p1 ORF type:5prime_partial len:817 (+),score=159.28,HATPase_c_3|PF13589.2|1.9e-19,zf-CW|PF07496.11|4.1e-11 R_Transcript_39210:1-2451(+)
CGAATTCCTCAAGTTCCACTAGTAAGTATAAAACCCACCCCCTTCTCTCTTTCTCTCTCCTCCATATCCATTTCTCTGATCACCGTCAGCTTTTTCCTCTCGCAAGGTTCTACTACAATGGTGGTTTTGAATGGCAGTTGTACTTCAAAGGAAGGTTGTTCATTGTGTTATTATACACTGATGAAAGATAACAAAATGATATGTCGTATGCAATGCAAGAATCCACCTATCCAAACGTCTTCATGTTGGAATGTGGAAATAGTTAAGAAGACCTTGATTAAAAATCTTCTTGATTTACCAAAATTTGAGCTTTTTCCTGCTTTCGAAGATAGTCACCAGCAACTTGAGTGGCCTAGATTCATGAGTTACCTTTACAAGTCTAACAAAGTTGCAGTTGCAAATTTTTTGGGATGGAAGATATACATATGTCCACCTGATGGCACAAAATCTAGCCGAACAGAAAACACTTTCCCGAAACTTGACCATGCTGTGGTGGCATATGAGGTCCAGGAAGGACATGGCGCTACCACAGATCCTAGCCATGCAACAACTGCTGTGCATGGAGCTGGGATTAGAAAAAATAATTCAGTAGAGTCAGTACCACTGAAGCAGTCACATCACATAAATGGAACCCTAGGGTCTCGACATCCACCTGTGGTCCCTTCAAATGATTGGATAGAAGATCAAATGGTCATGCCTTTGAAAGAGGCAGTCCATAGTACCCATTTTGTTGATGCCCCAGCAGTTGAGTCTGATGCATACGCAAAAGGAAGTACTTCAGCAGAAAAGGGTACATGTTCCTCTATTTCCAAATGTCCTAAGGCAGTTAACAGTGTCCGTCACTTTGCTGCAAAGGAAGACAATTCTACAGAAAGGAATTTTGTCCTTACAGACCCAAGTTATTTGAAGACTCTTGGCCAGGCTCATTCTAGTTGGATTTTTGGCGCAATCGCAGAGCTGGTTGACAATTCAAGAGATGCAAATGCCTCAAGGCTGGAGATTGCTGTTGAGACTATATTTTTTAAGGGGGCTGGTTGTGAGATCCCTGTGCTTTGTGTCTTAGATGATGGTTATGGAATGAACCACCAAGAGATCTTGAGAATGATTTCATTGGGGCATAAGCAGCCAGATGATGATGATACAGATCGTATTGGAAGGTTTGGTGTGGGCTTCAAGACAGGAGCAATGAGACTTGGGAGAGATGCTATAGTTCTTACACAGACAACAAATTCCTTTTCCATAGCCTTTCTTTCTCAGTCACTGAATGAGGGAAAAGATACTGTGGAGATACCAATTGTCAGCTACAATCGGCAAGGACAGTACATAGAGTTTGATACAAAGGTGCAGTCTGAAGCATCAGCCAAGAGAAACTTGAAAGCTATAAAGGAGTTCTCACCGTTTAATGAGTATCTTATTGGTCTAAAAGCAGCCCTGTTTCGTAACAACCCAGGAACACAGATTTACATATGGAATTTGGATAAATGGGGTTCAGATTACTGTTTGGAGTGGCTGGCAGGGCTGCGTGGCAGGAGCTCATTCCACCATGGTGATATATTCATTCGATCAAGACGGGTTAGATCTCGTCCTGGACAGACAAGTAAAAAGGTTGACCTAGACTATTCACTGCGGGCTTATTTGGAAGTCATATTTTTGGAACCTAGAATGAAGATTTATGTTCAAGGCTCACTGGTTAAAAGTCGCCCTTTAGCCAAATCTCTTAACAATACTGCTGTGGTGGAGGGTGAAATTATGGGGAAACGCGTCCGACTCACTCTTGGGCGCTCTCAAATAGAGTGGGAACAGGCAAACAGTGGAGTGTTTTTATACTGGCATGGCCGGTTAATTGAGGCATATAAAAGAGTGGGCGGCATGGTTCACAGTGCTGATATGGGCAGAGGTGTGATTGGTGTTATTGATGTTACTGAACTGATGGATGATGGAAATGGTGGTGTTTTGGTACATAACAACAAGCAAGGGTTCCAGGACTGTGAGCCATATGCACTTCTTGAAACATGGTTGGGAAACGAGGCAGATGAATACTGGGATAAACACTTTGATTCAGTACAGCTGAAAAATGTTAAGCCTTGGTACAAACCTGATCACGAGTGGGTGCAGTGTGAGAAGTGTAGGAAGTGGAGAATGCTAGACACTGGCTTTGACAGCCTGAAGTTAGCTGGAGAATGGTTCTGTTACATGGAACCTTTCAATGGAAGATGTGAAATGCCTGAGCACAAGCCTGATCCTGATGTTGTCACTGTGGGTACCAAGAGATTGCAGTTTTCCAGTGGAGCTTTGAACTTGAAAGAAGATACTCGGACTGATTATAAAGTTTCTAATGCAAAAGGTATTACAAAAGAGAATGACGAAGGTGAATCTGATGAGAATAACGTGGGGCATCCGAGGTTGAAAAGGCTTAGGAGAGGACCTACAAGAATCTCAGCTAAAAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39210.p1 GENE.R_Transcript_39210~~R_Transcript_39210.p1 ORF type:5prime_partial len:817 (+),score=159.28,HATPase_c_3|PF13589.2|1.9e-19,zf-CW|PF07496.11|4.1e-11 R_Transcript_39210:1-2451(+)
RIPQVPLVSIKPTPFSLSLSSISISLITVSFFLSQGSTTMVVLNGSCTSKEGCSLCYYTLMKDNKMICRMQCKNPPIQTSSCWNVEIVKKTLIKNLLDLPKFELFPAFEDSHQQLEWPRFMSYLYKSNKVAVANFLGWKIYICPPDGTKSSRTENTFPKLDHAVVAYEVQEGHGATTDPSHATTAVHGAGIRKNNSVESVPLKQSHHINGTLGSRHPPVVPSNDWIEDQMVMPLKEAVHSTHFVDAPAVESDAYAKGSTSAEKGTCSSISKCPKAVNSVRHFAAKEDNSTERNFVLTDPSYLKTLGQAHSSWIFGAIAELVDNSRDANASRLEIAVETIFFKGAGCEIPVLCVLDDGYGMNHQEILRMISLGHKQPDDDDTDRIGRFGVGFKTGAMRLGRDAIVLTQTTNSFSIAFLSQSLNEGKDTVEIPIVSYNRQGQYIEFDTKVQSEASAKRNLKAIKEFSPFNEYLIGLKAALFRNNPGTQIYIWNLDKWGSDYCLEWLAGLRGRSSFHHGDIFIRSRRVRSRPGQTSKKVDLDYSLRAYLEVIFLEPRMKIYVQGSLVKSRPLAKSLNNTAVVEGEIMGKRVRLTLGRSQIEWEQANSGVFLYWHGRLIEAYKRVGGMVHSADMGRGVIGVIDVTELMDDGNGGVLVHNNKQGFQDCEPYALLETWLGNEADEYWDKHFDSVQLKNVKPWYKPDHEWVQCEKCRKWRMLDTGFDSLKLAGEWFCYMEPFNGRCEMPEHKPDPDVVTVGTKRLQFSSGALNLKEDTRTDYKVSNAKGITKENDEGESDENNVGHPRLKRLRRGPTRISAKK*

Click here to download the sequence:
Link to NCBI Protein BLAST