Transcript Information: R_Transcript_392132.p1


Annotated TAIR IDAT5G03340.1
Annotated Gene NameATPase, AAA-type, CDC48 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:810091-813133 | Reverse length=810
E-Value1.8E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.91264804773594
Replicate 21.3122687760186
Replicate 30.57266843990381
Condition 2: 8 Hour
Replicate 11.8364398710434
Replicate 21.6770661380889
Replicate 30.45379026550967
Condition 3: 24 Hour
Replicate 10.8609177710389
Replicate 22.2055258890577
Replicate 32.7359630858622


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_392132.p1 GENE.R_Transcript_392132~~R_Transcript_392132.p1 ORF type:5prime_partial len:80 (+),score=26.03 R_Transcript_392132:3-242(+)
GAGGTGGCGGAGATCAAGGCAGCACACTTTGAGGAGTCAATGAAGTTTGCTCGACGAAGTGTTGGAGATGCTGACATTCGGAAATATCAGAGCTTTGCTCAGACATTGCAGCAATCTCGTGGCTTTGGGACGCAATTCCGGTTCCAGAATCAAGCTAGCAATACTAGTAGTGGTGCCCCAGCTTCTGATCCTTTTGTTTCTGGTCTTAATGCTTCTAATGATGATGATTTATATGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_392132.p1 GENE.R_Transcript_392132~~R_Transcript_392132.p1 ORF type:5prime_partial len:80 (+),score=26.03 R_Transcript_392132:3-242(+)
EVAEIKAAHFEESMKFARRSVGDADIRKYQSFAQTLQQSRGFGTQFRFQNQASNTSSGAPASDPFVSGLNASNDDDLYD*

Click here to download the sequence:
Link to NCBI Protein BLAST