Transcript Information: R_Transcript_392140.p1


Annotated TAIR IDAT1G79620.1
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29957633-29962174 | Reverse length=971
E-Value4E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2213877218771
Replicate 21.0927442595843
Replicate 30.9367067418501
Condition 2: 8 Hour
Replicate 10.18205104049996
Replicate 20
Replicate 30.067478106395491
Condition 3: 24 Hour
Replicate 10.085345008281428
Replicate 20.081989810002146
Replicate 30.1627338638431


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_392140.p1 GENE.R_Transcript_392140~~R_Transcript_392140.p1 ORF type:3prime_partial len:269 (+),score=20.87,LRR_8|PF13855.2|0.1,LRR_8|PF13855.2|9.1e-09,LRR_8|PF13855.2|0.98,LRR_4|PF12799.3|3.3e+03,LRR_4|PF12799.3|0.47,LRR_4|PF12799.3|0.017,LRR_4|PF12799.3|0.0075,LRR_4|PF12799.3|1.1e+04,LRR_4|PF12799.3|0.11,LRR_1|PF00560.29|3.6,LRR_1|PF00560.29|3e+02,LRR_1|PF00560.29|0.65,LRR_1|PF00560.29|3.7e+02,LRR_1|PF00560.29|1.9e+03,LRR_1|PF00560.29|32,LRR_1|PF00560.29|1.2e+02 R_Transcript_392140:105-908(+)
ATGGAGGAACCCAGTTCCATGACTCTGAAACTAGCAATTTGGTTATTTGCTATATTCACTCAGATTTTTCTCTCAACATCTGACACAGGCAATAATGATGTTCCTTCTTTAAACTCTCTTAAGGCACTCTGGCAGAATGTGCCACCCACTTGGAATGGTTTTGGTAATCCTTGTGACAGCAACTGGGACGGAGTTGTATGCAACAATTCCCGCGTGATATCTATAACTTTGTCAAGCATGGGATTGATTGGCACGCTCTCAGGTGACATCAAGGGATTATCAGAATTGCAAACTCTGGACCTATCCTACAACAAGGGCCTAACTGGGCCTCTTCCTCGAGCAATAGGCAGTTTAACAAAGCTTACAAACTTGATCCTCGTTGGCTGCAACTTCAACGGTGTAATCCCAGACACTATTGGATTTCTGAACCGGCTGATATACTTATCCTTGAACTCGAATAGTTTCACTGGGAGCATACCAAGGTCAATTGGTAAACTTACTAGCCTTTATTGGCTTGATCTAGCCGAAAACATGCTTACAGGAACTATACCTGTCTCCAACGGAACATCACCCGGTCTGGATAAGCTGATTCATACCAAGCACTTCCACTTTGGAAGAAATCAACTTTCTGGTTCAATTCCGCCCCAGATGTGTCATGAAAATATGACACTGATTCATTTGCTTTTGGACAACAATCAGCTTAGTGGCAGCATTCCCTCAACTCTAGGTCTTGTGAAGGCATTGGAGGTGGTACGACTTGATTGGAATACATTAAGTGGGCCGATCCCCTCAAACATAAGCAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_392140.p1 GENE.R_Transcript_392140~~R_Transcript_392140.p1 ORF type:3prime_partial len:269 (+),score=20.87,LRR_8|PF13855.2|0.1,LRR_8|PF13855.2|9.1e-09,LRR_8|PF13855.2|0.98,LRR_4|PF12799.3|3.3e+03,LRR_4|PF12799.3|0.47,LRR_4|PF12799.3|0.017,LRR_4|PF12799.3|0.0075,LRR_4|PF12799.3|1.1e+04,LRR_4|PF12799.3|0.11,LRR_1|PF00560.29|3.6,LRR_1|PF00560.29|3e+02,LRR_1|PF00560.29|0.65,LRR_1|PF00560.29|3.7e+02,LRR_1|PF00560.29|1.9e+03,LRR_1|PF00560.29|32,LRR_1|PF00560.29|1.2e+02 R_Transcript_392140:105-908(+)
MEEPSSMTLKLAIWLFAIFTQIFLSTSDTGNNDVPSLNSLKALWQNVPPTWNGFGNPCDSNWDGVVCNNSRVISITLSSMGLIGTLSGDIKGLSELQTLDLSYNKGLTGPLPRAIGSLTKLTNLILVGCNFNGVIPDTIGFLNRLIYLSLNSNSFTGSIPRSIGKLTSLYWLDLAENMLTGTIPVSNGTSPGLDKLIHTKHFHFGRNQLSGSIPPQMCHENMTLIHLLLDNNQLSGSIPSTLGLVKALEVVRLDWNTLSGPIPSNISN

Click here to download the sequence:
Link to NCBI Protein BLAST