Transcript Information: R_Transcript_392187.p1


Annotated TAIR IDAT5G23575.1
Annotated Gene NameTransmembrane CLPTM1 family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:7946563-7950041 | Forward length=593
E-Value3E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43344762161601
Replicate 20.11079841908337
Replicate 30
Condition 2: 8 Hour
Replicate 10.12921300763718
Replicate 20.11799937647064
Replicate 30.047893431716061
Condition 3: 24 Hour
Replicate 10.060574689255156
Replicate 20
Replicate 30.11550239940315


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_392187.p1 GENE.R_Transcript_392187~~R_Transcript_392187.p1 ORF type:3prime_partial len:379 (+),score=63.24,CLPTM1|PF05602.8|2.8e-127 R_Transcript_392187:63-1136(+)
ATGTGGGCCTACGCATATCTTTTCAAGGCAGGCTTTTCTCCAGACCCAACAAGCACCAAGTACAGAAAAGATGCAGTGATCGAAATCAAGTATGAGTTGGTCAAATATTTTCATGAGAAGAAGGACAACAAGAAGAACTTGGTCAGTGGTGAAGAGCCAGAGATCAAGGACCTTTCTGAGAGAAAGATCGTCGGGCACTGGAAGGACAACATCACTCTTGCATTGGTGACAGACACCAGCAACATCCAAATCAACCAACTGACTCCACAATTAACAAAACATATGTTGTTGAATCATGACGACAAAACTTATTATCCTACTTTCTATTTCAATGACTTTTGGGTCTTCAGAGATCACTACTATCCAATCAATGACACCCACCAACAACTTCCAATCAACCTCCGATTTGAGACCAAAGAAATGTGGAAGTGGACATTGATGATCCAAATGGACGAGTCTTTCTTGATGCAAAAGGAGTGGGGTACCAGCGCTGAAGGAGATTCCGACGAGGTCAAGAGAATGATCTCCGAGACCAACTTTTGGTTGTTGGTGTTGACTGGAGTTGTCTCCATTTTGCACATGACATTTGACTTTTTGGCATTCAAAAATGATATCGCATTTTGGAAGAACAAGAAAGATATGAAGGGGTTGTCTGTGAGAACCATCTTCATCAACTTTTTCTGCCAGATCATCATCTTCCTCTACTTGGTGGATAATGACACCAGTTGGATGATTCTCATCTCCTCTGGAATAGGACTGGTCATTGAAGGTTGGAAGATCACCAAGACTACCAATGTCAAGGTTACCAAGAGCTTTCCTTTCATCTCTGTTGAGGACAAGGAGTCCTACAATGAGACCAAGGAGTACGACAAGCAAGCTATGACTTACCTCACCTACATCCTCTTGCCGCTCGTGTTGGCATACTCTGTGTACTCCCTCATCTACAAGACACACAAGTCATGGTACTCATGGATCCTTGCGTCATTGACTGGTGCTGTTTACACTTTTGGTTTTATTTTGATGACTCCTCAACTTTTCTTGAACTACAAATTCAAGAGTGTTGCTCATTTGCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_392187.p1 GENE.R_Transcript_392187~~R_Transcript_392187.p1 ORF type:3prime_partial len:379 (+),score=63.24,CLPTM1|PF05602.8|2.8e-127 R_Transcript_392187:63-1136(+)
MWAYAYLFKAGFSPDPTSTKYRKDAVIEIKYELVKYFHEKKDNKKNLVSGEEPEIKDLSERKIVGHWKDNITLALVTDTSNIQINQLTPQLTKHMLLNHDDKTYYPTFYFNDFWVFRDHYYPINDTHQQLPINLRFETKEMWKWTLMIQMDESFLMQKEWGTSAEGDSDEVKRMISETNFWLLVLTGVVSILHMTFDFLAFKNDIAFWKNKKDMKGLSVRTIFINFFCQIIIFLYLVDNDTSWMILISSGIGLVIEGWKITKTTNVKVTKSFPFISVEDKESYNETKEYDKQAMTYLTYILLPLVLAYSVYSLIYKTHKSWYSWILASLTGAVYTFGFILMTPQLFLNYKFKSVAHLP

Click here to download the sequence:
Link to NCBI Protein BLAST