Transcript Information: R_Transcript_39242.p1


Annotated TAIR IDAT4G17310.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47455.7); Has 164 Blast hits to 164 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9686466-9686848 | Reverse length=99
E-Value1.7E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.652553606448
Replicate 238.648057403451
Replicate 328.785457864192
Condition 2: 8 Hour
Replicate 122.318974243949
Replicate 220.975694470493
Replicate 321.685552511082
Condition 3: 24 Hour
Replicate 128.240134554433
Replicate 229.862430179277
Replicate 326.9238137299


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39242.p1 GENE.R_Transcript_39242~~R_Transcript_39242.p1 ORF type:internal len:113 (+),score=9.01 R_Transcript_39242:3-338(+)
GCGGAGGAAAATCAAAAAAAAAAAAAAATTCATCGTAGCTATTCTTGGATCAAGCATTCATCAATGGCGTCTCGATGCTGTAGATTCATCAACAGAACATCTCTTTCTTCAATTAAATCTGCAATTAAATCAACATCTACTCCAACAAGACCTGCTGCTGGTCCTCTTCCCAGATTCACTTCCTCTTCACCACCTGCCCCCAGATTCAACTTCTCCAGGATTCCAACGGAGCTAGGAGGAGTGCAGTCGTTAATGCCGCTCCACAGCGCAGTAGCGGGGGCAAGGATGACGTCATGCCTGAGTACAAAATCAAGGAGCTGTAGAGCTCTCTCTCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39242.p1 GENE.R_Transcript_39242~~R_Transcript_39242.p1 ORF type:internal len:113 (+),score=9.01 R_Transcript_39242:3-338(+)
AEENQKKKKIHRSYSWIKHSSMASRCCRFINRTSLSSIKSAIKSTSTPTRPAAGPLPRFTSSSPPAPRFNFSRIPTELGGVQSLMPLHSAVAGARMTSCLSTKSRSCRALSQ

Click here to download the sequence:
Link to NCBI Protein BLAST