Transcript Information: R_Transcript_39243.p1


Annotated TAIR IDAT4G17310.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47455.7); Has 164 Blast hits to 164 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:9686466-9686848 | Reverse length=99
E-Value4E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.758164346361
Replicate 236.122667382878
Replicate 333.005406858972
Condition 2: 8 Hour
Replicate 178.986661120146
Replicate 259.388578653471
Replicate 356.796975167017
Condition 3: 24 Hour
Replicate 171.095144963213
Replicate 2115.01936088097
Replicate 391.551797023689


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39243.p1 GENE.R_Transcript_39243~~R_Transcript_39243.p1 ORF type:5prime_partial len:93 (+),score=1.50 R_Transcript_39243:1-279(+)
CAATCATATCGGAATTATAGATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTCATCGAAGCTATTCCTGGAGCAAGCATTCATCAATGGCGTCTCGATGCTGTAGATTCATCAACAGAACATCTCTTTCTTCAATTAAATCCGCATTTAAATCAGCTTCTACTCCAACGAGACCTGCTGCTGGTCCTCTTCCCAGATTCACTTCCTCTTCACCACCTGCCCCCAGATTCAACTTCTCCAGGATTCCAACGGAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39243.p1 GENE.R_Transcript_39243~~R_Transcript_39243.p1 ORF type:5prime_partial len:93 (+),score=1.50 R_Transcript_39243:1-279(+)
QSYRNYRLKKKKKKKKKKKKKKKKFIEAIPGASIHQWRLDAVDSSTEHLFLQLNPHLNQLLLQRDLLLVLFPDSLPLHHLPPDSTSPGFQRS*

Click here to download the sequence:
Link to NCBI Protein BLAST