Transcript Information: R_Transcript_39273.p1


Annotated TAIR IDAT3G11110.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3479979-3480455 | Forward length=158
E-Value5.2E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.647619569956
Replicate 29.8739358714483
Replicate 316.963367841475
Condition 2: 8 Hour
Replicate 110.191414059124
Replicate 214.625225420451
Replicate 314.030704425488
Condition 3: 24 Hour
Replicate 115.512031910611
Replicate 212.398632024973
Replicate 314.788989653309


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39273.p1 GENE.R_Transcript_39273~~R_Transcript_39273.p1 ORF type:complete len:185 (+),score=3.57,zf-RING_2|PF13639.2|1.1e-13,zf-RING_11|PF17123.1|3.2e-10,zf-rbx1|PF12678.3|1.9e-09,zf-C3HC4|PF00097.21|1e-07,zf-C3HC4_2|PF13923.2|2.2e-07,zf-ANAPC11|PF12861.3|6.6e-06 R_Transcript_39273:167-721(+)
ATGTCAAATTTGGGCTACCACCACACGCGCCGCCTTCTAAACCACCTGCACACACCCCAAGAAAACTCCCACTTACTTCACTGGCATTACACCGAGCTTGACGACCATAACTTCCAAATCCACGGTCAAACCCTCTTTTACCTCTTCATCCTCTTCTCAATCATCCTCTTAGTAACTCTCCTCCTCCTCTACGCGCGTTGGTATTTCCGTTTCCGTCACCTCCACTCAGCCGGCCCTGTCCACTACCATAACCACCAGTACCCTTCACACGCGCCGCCTTGCACGGAGGCGCGTGGACTTGACCCAGCTGTCATCAAGGCCATGCCCATCATTCTCCACCAAGAAACACCCGTTGAAAGAGAAGATGAGATGGAGTGTTGTATTTGTTTAGGAGTTTTTGAAGATGGGGATAAAGTTAAAGTGTTGGCTCAGTGTAGACACCGTTTTCACTCTGATTGTGTGGATCGTTGGCTCCTCGCTCAGTCCAGTTGCCCTCTTTGTCGAGTCTCTCTCCGAGTCCACCCGCCCTCTGACTCGCCACTTGCTCAAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39273.p1 GENE.R_Transcript_39273~~R_Transcript_39273.p1 ORF type:complete len:185 (+),score=3.57,zf-RING_2|PF13639.2|1.1e-13,zf-RING_11|PF17123.1|3.2e-10,zf-rbx1|PF12678.3|1.9e-09,zf-C3HC4|PF00097.21|1e-07,zf-C3HC4_2|PF13923.2|2.2e-07,zf-ANAPC11|PF12861.3|6.6e-06 R_Transcript_39273:167-721(+)
MSNLGYHHTRRLLNHLHTPQENSHLLHWHYTELDDHNFQIHGQTLFYLFILFSIILLVTLLLLYARWYFRFRHLHSAGPVHYHNHQYPSHAPPCTEARGLDPAVIKAMPIILHQETPVEREDEMECCICLGVFEDGDKVKVLAQCRHRFHSDCVDRWLLAQSSCPLCRVSLRVHPPSDSPLAQV*

Click here to download the sequence:
Link to NCBI Protein BLAST