Transcript Information: R_Transcript_39280.p1


Annotated TAIR IDAT5G41040.1
Annotated Gene NameHXXXD-type acyl-transferase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16431448-16433086 | Forward length=457
E-Value3E-182
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 157.203983552795
Replicate 243.758644792846
Replicate 344.67170634016
Condition 2: 8 Hour
Replicate 178.110671981243
Replicate 2102.19131981626
Replicate 3127.23091556346
Condition 3: 24 Hour
Replicate 172.449404117334
Replicate 259.088855594693
Replicate 367.504135950244


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39280.p1 GENE.R_Transcript_39280~~R_Transcript_39280.p1 ORF type:5prime_partial len:321 (+),score=65.90,Transferase|PF02458.11|7.5e-66 R_Transcript_39280:3-965(+)
ATTGGTGATTCTACAAAGCCTGATCCTGTGACTTTGGGAAAATTGGTTTATGATATTCCTGGTGCTAAGAATTTGCTTGAAATTCCTCCCCTTGTTGCTCAGGTAACAAAATTCAAGTGTGGAGGGTTTGTGCTGGGACTATGCATGAACCACTGCATGTTTGATGGGATAGGAGCAATGGAGTTTGTAAACTCATGGGGAGAAACTGCAAGAGGAATATCTCTAAACATCCCTCCATTCCTAGACAGGACAATCCTCAAGTCTAGGGAACCCCCACAAATTGAGTTCAAGCACCAAGAATTCGAGGAAATTGAAGACATATCAGGAAGCAGCAATGTGTATGAGGATGAGATGCAATACAGGTCCTTCTGTTTCGAGCCCAAACATCTGGAGAAGCTCAAGATGAAGGCAATGGAAGACTGTATCTTAGAGAAATGCACCACATTCGAGGCCCTCTCAGGCTTCGTATGGAGGGCTAGGACGAAAGCCCTTAAGATGAAACCCCAACAAAAGACTAAACTCCTCTTTGCAGTTGATGGGAGGCCTAAATTCAGCCCCCCATTACCAAAGGGCTACTTTGGAAATGGGATTGTGCTCACAAATTCAATCTGTTCAGCAGGGGAATTGACAGAGAACCCCCTCTCCTTTGGGGTTGGATTAGTCCAAGACGCGATTAAGATGGTTACCGATAGTTACATGAGATCAGCCATCGACTATTTCGAAACTACAAGGGCAAGGCCTTCTTTGAGCTCAACACTTTTGATCACTACTTGGTCAAGGCTTTCCTTTCATACTACTGATTTTGGATGGGGTGAACCTGTTTTATCAGGCCCTGTGGCTTTGCCTGAAAAAGAAGTTATTTTGTTTCTGTCTCATGGTCAACAAAGAAGGTCCATCAATGTCCTCTTGGGTTTGCCTGCTTCTGCTATGAACACATTTCAGCAACAGATGAACCAAATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39280.p1 GENE.R_Transcript_39280~~R_Transcript_39280.p1 ORF type:5prime_partial len:321 (+),score=65.90,Transferase|PF02458.11|7.5e-66 R_Transcript_39280:3-965(+)
IGDSTKPDPVTLGKLVYDIPGAKNLLEIPPLVAQVTKFKCGGFVLGLCMNHCMFDGIGAMEFVNSWGETARGISLNIPPFLDRTILKSREPPQIEFKHQEFEEIEDISGSSNVYEDEMQYRSFCFEPKHLEKLKMKAMEDCILEKCTTFEALSGFVWRARTKALKMKPQQKTKLLFAVDGRPKFSPPLPKGYFGNGIVLTNSICSAGELTENPLSFGVGLVQDAIKMVTDSYMRSAIDYFETTRARPSLSSTLLITTWSRLSFHTTDFGWGEPVLSGPVALPEKEVILFLSHGQQRRSINVLLGLPASAMNTFQQQMNQI*

Click here to download the sequence:
Link to NCBI Protein BLAST