Transcript Information: R_Transcript_392872.p1


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.15468610978575
Replicate 20.17793474929066
Replicate 30.3882497897653
Condition 2: 8 Hour
Replicate 10.4150146601228
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.38911537674075
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_392872.p1 GENE.R_Transcript_392872~~R_Transcript_392872.p1 ORF type:complete len:118 (+),score=11.76,zf-RVT|PF13966.2|1.1e-09,zf-RVT|PF13966.2|1.6e+04 R_Transcript_392872:722-1075(+)
ATGTTTAGGGAGTGGTCGACATGGCTCCACATTCCCGATTTCCTGTTGGCCAAGTTTAGGAAGGTTAAGGTACCTCTTAAGTTACGGGCTTTCACGTGGACCCTAGCGTTGGAGAAAATCAGTACCGATGACATTTTGCAGCGGAGGAGACCAAATTGGTGCATGTCGCCTGATGTTTTTCCTGTGTGTGGGGATAGTGGTGAGATGGCATGCCATTTATATCTGCATTGTTCTATGGCTCTTGTTCTGTGGGGGAACTTTTTTGGGGAAAAGGGGAAGAGTGGGTGTGCTTGGAGAGGGTGCAGGCGTTCTTGCAAGTGCGCTATATGGGTTTTGTGGGGGACAAGTAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_392872.p1 GENE.R_Transcript_392872~~R_Transcript_392872.p1 ORF type:complete len:118 (+),score=11.76,zf-RVT|PF13966.2|1.1e-09,zf-RVT|PF13966.2|1.6e+04 R_Transcript_392872:722-1075(+)
MFREWSTWLHIPDFLLAKFRKVKVPLKLRAFTWTLALEKISTDDILQRRRPNWCMSPDVFPVCGDSGEMACHLYLHCSMALVLWGNFFGEKGKSGCAWRGCRRSCKCAIWVLWGTSR*

Click here to download the sequence:
Link to NCBI Protein BLAST