Transcript Information: R_Transcript_39288.p1


Annotated TAIR IDAT5G57480.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23279406-23280968 | Reverse length=520
E-Value9.3E-221
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0352995737155
Replicate 25.9826119153517
Replicate 35.4876394967189
Condition 2: 8 Hour
Replicate 16.1770149322452
Replicate 27.4671547346246
Replicate 37.4451252272368
Condition 3: 24 Hour
Replicate 19.4997823011189
Replicate 210.927560212573
Replicate 39.891176891175


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39288.p1 GENE.R_Transcript_39288~~R_Transcript_39288.p1 ORF type:complete len:551 (+),score=41.99,AAA_assoc|PF14363.2|9.7e-22,AAA_assoc|PF14363.2|1.4e+04,AAA|PF00004.25|4.8e-14,AAA|PF00004.25|4.8e+03 R_Transcript_39288:110-1654(+)
ATGGCGTCAATAATGGGAGTGATGGCCTTTTGTCAAGGTCTTCTTTCCACCATTTTTCCACCTGAACTCCGGTTCTCTCTCCTCAAACTACTCAACCGTTTCACCAACTACTTCTCCTCTTACTGCTACTTTGATATCACTGAGATTGATGGTGTCAACACCAATGAACTCTATAATGCCGCTCAGCTCTATCTCAGCAGCTCCACCACCTCGTCCTCGACTCGGCTTAATCTAACTCGCTCACTCAACTCGTCCAAGGTCACCTTCGGCCTGTCCCAGAACGACACCCTCTTCGACACCTTCGACGGGGTCACCGTCCAATGGGAGCACATTGTCGTGCAGCGGCCGCCGCAATCGTTCTCGTGGCGGCCTGTCCCGGACGAGAAGCGGGGGTTCTCGCTCCGGGTCAGGAAGGCCCACAGCCGGGACTTCCTGGGCCCATACCTCGACCACATCATGGCCCGCGCAGCTGAGATCCGGCGTCGCAGCCAGGACCGGTACCTCTACACCAACTCCCGGGCCGGGGGCGGGCTAGACGCCAGCCGCCCGGGCCACCCTTGGGAAGCGGTCCCGTTCAAGCACCCCAGCACCTTCGACACCCTCGCCCTCGATCCGGCCCGAAAGGCCGAGATCATGGCCGACCTCCGTGAATTCGCGGAGGGGGAGGCCTTCTACCGGGCCACAGGCCGGGCCTGGAAGAGGGGGTACCTCCTCCACGGGCCGCCAGGCACGGGGAAGTCGAGCATGATTGCCGCGATGGCCAACTACCTCGGGTACGACATCTACGACCTTGAGCTGACAGAGGTCGGGTCAAACTCCGAGCTCCGGAAGCTGCTCATGAAGACCACCCCGAAGTCGATCATCGTCATCGAGGACATCGACTGCTCGCTCGCCCTCGGGGCCCGGACTACCCGAGGGCGGAAGAGCCCGTCCCGTTTTGTGGTCGGGCCAGTGGACGGGGACGGGCCGGGCTTATCGGTGACCCTGTCGGGCCTGTTGGGGTTCACCGACGGGCTGTGGTCGTGCTGTGGGAGTGAGAGGATATTTGTATTTACGACGAACCACGTGGAGAGGTTGGATCCGGCATTGTTGAGGAGTGGCAGGATGGACATGCATATCCATATGAGCTACTGTTCTTTTGCGGCGTTGAAAATTTTATTGAAAAATTATGTGGGAATTGAGAATGAGGATGATTTAGGGGAGGAAATGAGGGAGGAGTTCAAGGAGGTGGTGGAGAAGGCGAGGATGACGCCGGCTGACGTTAGCGAGGTGTTGATTCGACGGAGGAGAGAGAAAATGGTGGCGGTTGCTGAGTTGTTGGAGGTGATGAAGAAAAGGGGAGAAAGGAACTGTGAGGAGAAATTGAGTTCTCAAGAGGAAGAGGAGGAGCAAGAAAAGAGAGAGTTAGAAATGCACAATGGCGGTGGTTTTGACGACGGTTTTGGCGGTGGTGGTGAGATTGGGAAAAATGTGAAAGAGGAGGGTAATATTGGGTTTGATATTTCTAAAGATTGTGATGATGATAGTAATGACAAGTACAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39288.p1 GENE.R_Transcript_39288~~R_Transcript_39288.p1 ORF type:complete len:551 (+),score=41.99,AAA_assoc|PF14363.2|9.7e-22,AAA_assoc|PF14363.2|1.4e+04,AAA|PF00004.25|4.8e-14,AAA|PF00004.25|4.8e+03 R_Transcript_39288:110-1654(+)
MASIMGVMAFCQGLLSTIFPPELRFSLLKLLNRFTNYFSSYCYFDITEIDGVNTNELYNAAQLYLSSSTTSSSTRLNLTRSLNSSKVTFGLSQNDTLFDTFDGVTVQWEHIVVQRPPQSFSWRPVPDEKRGFSLRVRKAHSRDFLGPYLDHIMARAAEIRRRSQDRYLYTNSRAGGGLDASRPGHPWEAVPFKHPSTFDTLALDPARKAEIMADLREFAEGEAFYRATGRAWKRGYLLHGPPGTGKSSMIAAMANYLGYDIYDLELTEVGSNSELRKLLMKTTPKSIIVIEDIDCSLALGARTTRGRKSPSRFVVGPVDGDGPGLSVTLSGLLGFTDGLWSCCGSERIFVFTTNHVERLDPALLRSGRMDMHIHMSYCSFAALKILLKNYVGIENEDDLGEEMREEFKEVVEKARMTPADVSEVLIRRRREKMVAVAELLEVMKKRGERNCEEKLSSQEEEEEQEKRELEMHNGGGFDDGFGGGGEIGKNVKEEGNIGFDISKDCDDDSNDKYN*

Click here to download the sequence:
Link to NCBI Protein BLAST