Transcript Information: R_Transcript_39309.p1


Annotated TAIR IDAT4G12070.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:7231941-7234272 | Forward length=483
E-Value5E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17138930473914
Replicate 20.39429672143283
Replicate 30.32263010698806
Condition 2: 8 Hour
Replicate 10.34487133728514
Replicate 20.62988399552635
Replicate 30.42609414601847
Condition 3: 24 Hour
Replicate 10.10778313252443
Replicate 20.62127489832612
Replicate 30.51379588466895


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39309.p1 GENE.R_Transcript_39309~~R_Transcript_39309.p1 ORF type:3prime_partial len:213 (+),score=24.64,rve|PF00665.22|1.1e-10,gag_pre-integrs|PF13976.2|2.8e-08 R_Transcript_39309:661-1296(+)
ATGGGTGTATTGTGCCTGAAGGAAGGAAGAAACAGAGGTATGTGGTCAGAAGCGTCGATGATCCTAATTATGTTGTTGCCTTCTTTGATCGTACCGAATCTCAGTGCCTGGAATTGCAAGGATCGTACTTTGACGAAGCTGATTGGAGTGGGTGAGCGGTCTGATGTGGTCTACATCTTCCGAGGGTCTCTGCTCGCACATGTCAACTCAATCACCAAGGTCTCCAGTTATGATATATGGCATCAACGTTTGGGTCATCCATCTTCCAAAGCTATTAGTTTACTTCCTGTTGTGTCCATGGAACGTATTGTGTCTAGTCATAAAGCTTGTGATGTTTGCCTTAGAGCCAAGAAAACTCGTGATATTTTTCCACTTAGTGATAGTCGTGCTTCTGCACCTTTTGAAATAATACATATTGATGTTTGGGGCCCTTATCATCAAGTTTCTACCTGTGGTGCTTATTATTTTCTCACTGTTGTTGATGATTATTCTCGAAATGTGTGGGTGTATTTGTTGGCTTCTATAACCGAAGTGCCTGTTGTCTTTAATAAATTTCTTGCCATGGCAAAGACGCAATTTGATAAAGTGGTTAAAATTGTTCGATCCGACAATGGAACTGAATTCACTAAACTTAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39309.p1 GENE.R_Transcript_39309~~R_Transcript_39309.p1 ORF type:3prime_partial len:213 (+),score=24.64,rve|PF00665.22|1.1e-10,gag_pre-integrs|PF13976.2|2.8e-08 R_Transcript_39309:661-1296(+)
MGVLCLKEGRNRGMWSEASMILIMLLPSLIVPNLSAWNCKDRTLTKLIGVGERSDVVYIFRGSLLAHVNSITKVSSYDIWHQRLGHPSSKAISLLPVVSMERIVSSHKACDVCLRAKKTRDIFPLSDSRASAPFEIIHIDVWGPYHQVSTCGAYYFLTVVDDYSRNVWVYLLASITEVPVVFNKFLAMAKTQFDKVVKIVRSDNGTEFTKLK

Click here to download the sequence:
Link to NCBI Protein BLAST