Transcript Information: R_Transcript_3932.p1


Annotated TAIR IDAT5G61130.1
Annotated Gene Nameplasmodesmata callose-binding protein 1
Annotated Gene Symbol(s)PDCB1
Annotation TypeOrtholog
Chromosome Positionchr5:24587438-24589369 | Reverse length=201
E-Value7.5E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 169.69312364529
Replicate 258.026139332315
Replicate 362.611749429483
Condition 2: 8 Hour
Replicate 157.504682830652
Replicate 258.883655515122
Replicate 359.075241837259
Condition 3: 24 Hour
Replicate 190.648553993026
Replicate 268.638639032191
Replicate 388.94367268221


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3932.p1 GENE.R_Transcript_3932~~R_Transcript_3932.p1 ORF type:5prime_partial len:330 (+),score=22.83,X8|PF07983.9|2.1e-19 R_Transcript_3932:3-992(+)
ACTTTTCACTCCTTGGCCTTCATTTCTTTTTTCATATTCTTTTATATACTCATAAATGATAAATGGACTGCCCTTGAAATACAAGAAATAACCCCACTGCCATATCACTCTGTTTTTCTCATCACTTCTCTCTCTCAAGCTACCGGCTTTAGTTATTACACTTACACACTGTTCATAGCTCTGTTTTTCTTATCTCTTCTTCTACAAAAAAACAGAAAAAAAAAATCAGAAAAAGGAGTTCGGGTGTTCAAGATAAATCAAAATATGGCAGCTCTGGTGCTTGGTTTGCTCATCTTAGCTATGGCTGGTCACTCAAGTGCAAGTTTTTGTGTATGCAGATCAGGGATAAGTGACCAAATTCTGCAAAAAGCAATAGACTATGCATGTGGAGCAGGTGCAGATTGTAACCCCATAAGTCCAAAGGGGCAATGTTATAATCCTAACACTATGGTCAGCCACTGTTCTTATGCTGTTAACAGTTACTACCAAAAGAAGGCTGCTTCTGGAGCTACTTGTGATTTTGGTGGTGCTGCCACCCTTACTAACTCTGATCCAAGTTCTAATGGCTGCTCCTTTTCGGCTACTTCCGGGTCTGGTAGCACTGGCACCGGCACCGGCACCGGCACCGGTGCCACTGGTCCAGTCACAACAGTTCCCACGACTTCCCCCACTACACCAACCACCACTCCAGTACCTGGTGCCGGCACTGGCACAGGTACAGGCACTGGCACTGGCACTGGCACAGGCACAGGTACAGGTACAGGCACCGCCACCAATCCTACAGTTGGTACCGGAACTGGCGGAACCACCTCACCCTACACAGCCGGTACCCCATCGAGTAACGGCGTATTTGGCGTCGGCGGCACTGGTCTTGCCCCTACTGGATCGAGCATGGACGACAGCCACGCTGGGATGAAACTTGAGACCGCAAACTCGGGTTCAATCCTTCTAACCCTGGCGATCTCAGGAATCATTTTTTTGTGGAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3932.p1 GENE.R_Transcript_3932~~R_Transcript_3932.p1 ORF type:5prime_partial len:330 (+),score=22.83,X8|PF07983.9|2.1e-19 R_Transcript_3932:3-992(+)
TFHSLAFISFFIFFYILINDKWTALEIQEITPLPYHSVFLITSLSQATGFSYYTYTLFIALFFLSLLLQKNRKKKSEKGVRVFKINQNMAALVLGLLILAMAGHSSASFCVCRSGISDQILQKAIDYACGAGADCNPISPKGQCYNPNTMVSHCSYAVNSYYQKKAASGATCDFGGAATLTNSDPSSNGCSFSATSGSGSTGTGTGTGTGATGPVTTVPTTSPTTPTTTPVPGAGTGTGTGTGTGTGTGTGTGTGTATNPTVGTGTGGTTSPYTAGTPSSNGVFGVGGTGLAPTGSSMDDSHAGMKLETANSGSILLTLAISGIIFLWN*

Click here to download the sequence:
Link to NCBI Protein BLAST