Transcript Information: R_Transcript_39345.p1


Annotated TAIR IDAT1G54130.1
Annotated Gene NameRELA/SPOT Homolog 3
Annotated Gene Symbol(s)RSH3, AT-RSH3, ATRSH3
Annotation TypeOrtholog
Chromosome Positionchr1:20211177-20213761 | Forward length=715
E-Value2.6e-312
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 158.619102897997
Replicate 239.16956884385
Replicate 349.663347057204
Condition 2: 8 Hour
Replicate 142.490177408455
Replicate 261.88389708429
Replicate 361.903602045717
Condition 3: 24 Hour
Replicate 139.517009919956
Replicate 236.480757352622
Replicate 338.625361212172


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39345.p1 GENE.R_Transcript_39345~~R_Transcript_39345.p1 ORF type:complete len:714 (+),score=125.46,HD_4|PF13328.2|9.5e-46,RelA_SpoT|PF04607.13|1.2e-34,HD|PF01966.18|1.3e-06,HD|PF01966.18|6.2e+03 R_Transcript_39345:447-2588(+)
ATGGCGGTTTCAACAATTGCTATGTACGCGAGTCCACCGAGCAGCGTATGTTCGACACCTTATCCATGCTACGACTTCGATCTGAACGGCAGATCATCGGCGTCAACCGCCGCCACGTCATCACCGTCAACCTCTCAGAGGCCGTCGGCGATGATAGGCGGCTTGTCGTGTCTCCTCAAGCACTCTCAAACTCATCATCCATCAAGCGAACCAGAACGAGGTGATGATCATCACTTGAGCAGCTCATTTCGGTACTCAAGCTGCTCGCCGTTGAGCTCTTCGCTGTCGAAGCGAGACCAGAGCCCCGTCTCAGTCTTGCCGGGCCCGGTCTCTGTCTCCAGTAGCGCTTCTCCAATGCGAGCTGCTTCGGGGTTGTTCAATGGGTTTGTGAGGAACAGTTTTAGTAGTAATGGGAATGGATTAGCGTCGGGTTTAGACTATGATTTGTCGAGCTCTCGGTTGAATAGTTGCTCGTCGCTTGATGTAGAGGTGGAGGTGGATGCGGAGGAGCTTACTTTTAATATGGAGGATAATAGTAACAGTAATTTTGCAAGTGGTGGGAATGGTGTAGAGGAGTTGCTTGCAAGTGCTAGAAGAAGGCATAAGATATTTTTTGAGGATTTTGTTGTCAGGGCTTTCTATGAGGCTGAAAAGGCTCACAGAGGCCAGGTGAGAGCAAGTGGACATCCATATTTGCAACACTGTGTGGAGACTGCCGTGTTGTTGGCTACAATTGGAGCTAATTCCGCTGTGGTTGCTGCTGGGCTGTTACATGACACCATTGATGATTCTTTTGTGACTTATGATTATATTCTCAGTATATTTGGACCTGGGGTGGCTGATTTGGTTCATGGGGTGTCTAAGCTGAGTCACTTGAGCAAGCTTGCACGTGAAAATAATACCGCAAACAAAACCATTGAAGCAGATCGGCTGCATACCATGTTTCTCGCCATGGCAGATGCAAGAGCTGTGTTGATAAAATTGGCTGATAGATTGCATAATATGATGACACTAGAAGCTTTGCCTTTGCACAAACAGCAGAGGTTTGCAAAGGAAACACTGGAGATATTTGCACCTTTGGCTAACAGACTAGGCATCTCCACTTGGAAAGAGCAACTAGAGAATTTGTGTTTTAAGCATTTACACCCAAATCAGCATGATGAACTCTCCTCCAAGCTTTTGAAGTCATTTGATGAAGCAATGGTCACATCAGCTATAGAGAAACTTGAACAGGCTCTGAAGGCTGAAAACATATCATACTGTGACTTGTCTGGTCGTCACAAAAGCTTATATAGCATTTATCGCAAAATGTTGAAGAAGAAGCTGACAATGGACCAGGTTCACGATATTCATGGCTTGCGTTTGATTGTTGAAGATGAAGATGACTGTTTTGGAGCACTAAAAGTTGTTCATAAGTTGTGGTCTGAAGTTCCTGGGAAGATGAAGGACTATATTCATTGTCCAAAGTGCAATGGGTACCAATCTCTTCATACTGTTGTGGTTGGTGAGGGAATGGTTCCACTCGAAGTTCAAATCCGTACCAAGGAAATGCATTTGCAGGCAGAGTATGGGTTTGCTGCTCACTGGAGGTACAAGGAAGATGATTGTAGGCACTCATCTTTTGTACTTCAAATGGTTGAATGGGCTAGATGGGTTGTAACTTGGCATTGTGAAACAATGAACAAGGATCCTTCATTAGTCGCCAGTGCTGATTCCATCAAGCCACCCTGTAAATTCCCTACTCATTCTGAAGGCTGTCTGTATTCATACCTGCCTCGTTGTAATCAGGACGGACCAGTGTTTGTCATCTTGATTGACAATGACAAGATGTCTGTTCAAGAATTTCCTGCAAACTCAACTATGATGGACCTGTTAGAGTTTACTGGCCATGGTAGCCCGCGTTGGACACCGTATGGTTTCCCCGTGAAGCAGGAGCTGAGACCCCGGCTTAACCGTGAGCCTGTGAATGATCCAACTTGCAAGTTGAAGATGGGAGATGTGATCGAGCTGACCCCGACCATACCCGACAAGTCGCTCACTGAGTACAGGGAAGAGATACAGCGGATGTACAACAGGGGTCTGTCAGTGTCAACTCCAAGCACTGCTCCAGCAACTGCTAGAATGGTTGGCTGGACAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39345.p1 GENE.R_Transcript_39345~~R_Transcript_39345.p1 ORF type:complete len:714 (+),score=125.46,HD_4|PF13328.2|9.5e-46,RelA_SpoT|PF04607.13|1.2e-34,HD|PF01966.18|1.3e-06,HD|PF01966.18|6.2e+03 R_Transcript_39345:447-2588(+)
MAVSTIAMYASPPSSVCSTPYPCYDFDLNGRSSASTAATSSPSTSQRPSAMIGGLSCLLKHSQTHHPSSEPERGDDHHLSSSFRYSSCSPLSSSLSKRDQSPVSVLPGPVSVSSSASPMRAASGLFNGFVRNSFSSNGNGLASGLDYDLSSSRLNSCSSLDVEVEVDAEELTFNMEDNSNSNFASGGNGVEELLASARRRHKIFFEDFVVRAFYEAEKAHRGQVRASGHPYLQHCVETAVLLATIGANSAVVAAGLLHDTIDDSFVTYDYILSIFGPGVADLVHGVSKLSHLSKLARENNTANKTIEADRLHTMFLAMADARAVLIKLADRLHNMMTLEALPLHKQQRFAKETLEIFAPLANRLGISTWKEQLENLCFKHLHPNQHDELSSKLLKSFDEAMVTSAIEKLEQALKAENISYCDLSGRHKSLYSIYRKMLKKKLTMDQVHDIHGLRLIVEDEDDCFGALKVVHKLWSEVPGKMKDYIHCPKCNGYQSLHTVVVGEGMVPLEVQIRTKEMHLQAEYGFAAHWRYKEDDCRHSSFVLQMVEWARWVVTWHCETMNKDPSLVASADSIKPPCKFPTHSEGCLYSYLPRCNQDGPVFVILIDNDKMSVQEFPANSTMMDLLEFTGHGSPRWTPYGFPVKQELRPRLNREPVNDPTCKLKMGDVIELTPTIPDKSLTEYREEIQRMYNRGLSVSTPSTAPATARMVGWTS*

Click here to download the sequence:
Link to NCBI Protein BLAST