Transcript Information: R_Transcript_393667.p1


Annotated TAIR IDAT3G08670.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51540.1); Has 48380 Blast hits to 29827 proteins in 1356 species: Archae - 46; Bacteria - 5589; Metazoa - 17361; Fungi - 13192; Plants - 2237; Viruses - 905; Other Eukaryotes - 9050 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:2633946-2636536 | Forward length=567
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1880625473486
Replicate 20.37271539200529
Replicate 30.54217130405095
Condition 2: 8 Hour
Replicate 10.72443387417885
Replicate 20.79387746181724
Replicate 31.2351687700263
Condition 3: 24 Hour
Replicate 10.88299258568093
Replicate 21.4355493952447
Replicate 31.295130454846


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_393667.p1 GENE.R_Transcript_393667~~R_Transcript_393667.p1 ORF type:internal len:338 (+),score=58.53 R_Transcript_393667:1-1011(+)
CAAAAACTGAACAATCCTGTTGTCCAATCTCATTCCAATCAGATGCATGCTGTGGGAGGAAAGTCTCAAGGTATTGATGTTTTCAAATTAAACCCTGAGAAGTTCCAAGACACGAATGTTGGCACTGTCAATCAATTGAGCAGGCAACAAAGAGTTCTGAAAGCATTACACCGATCTGAGAGGAAGGGGTCTATCTCAGAAATGGGGCAACATCCAACCTTTGATAGATATGAAGCGGCAGCACCTTGGAAAGGAAAAAGTAAGATTCAAGGCAGTGAATCTGTAAAACAATCTCTGAAGTTGCAAGGAAACAAACTGGAAGCTACCGATCAAGATTCCTTTAAAAGAGAGAGATCTGGAGTCCCGACCATGCCGCTAGATCAATCACAACATAGCTGCTCTGTAGCAGCAACCTCTGATTTTAAAGCGAATGCTCAGTTGTCTGCCAAGCCAGCCCGGAAGATCACTCCAGGCATAAACAATTGCGAGGATACTCTGTCTTCTAGAATTGATAGCAACAAGCACTCGGAGGCAGCTGGTCCTAGTTCGCATAATCCACAATGTATCCTAAATTCATCTCGTGCATCACATATATCCGCTCATTCAACCAAGATGTTTCACAGTCCATCCAGGACCAGGGGTGCTCAGGTTGTCAGAGATCACTATCCAGCATCCCATATGCTATCCTTTCCTGCTAGGATGCTTAGTAGCCCCTCTAGGAGCATAAACACAGAGGAGAAGCAGGTGAGTACTGCGATTAGGAGTATAAGTGCAGCCAAGCCTTGTGAGGAGTTGGATGTGAGAAAAAGCTGTGAGTCTGTGCCCAAAGCAAGAAACCCATCATCGATTCGTAGATTGAGTTTCACAATGGGCAAGATGATGAAGAATGCCAGCTCCAGGGACAACTCGCCCCTTCGTAGGTCAAGTTCAAAAGATTGCATTGCCAAATCTGGGTCTGAGGGGACTACTGGCGTGTCATCCATTGATAATCCTTGCAACGATAAGTCAACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_393667.p1 GENE.R_Transcript_393667~~R_Transcript_393667.p1 ORF type:internal len:338 (+),score=58.53 R_Transcript_393667:1-1011(+)
QKLNNPVVQSHSNQMHAVGGKSQGIDVFKLNPEKFQDTNVGTVNQLSRQQRVLKALHRSERKGSISEMGQHPTFDRYEAAAPWKGKSKIQGSESVKQSLKLQGNKLEATDQDSFKRERSGVPTMPLDQSQHSCSVAATSDFKANAQLSAKPARKITPGINNCEDTLSSRIDSNKHSEAAGPSSHNPQCILNSSRASHISAHSTKMFHSPSRTRGAQVVRDHYPASHMLSFPARMLSSPSRSINTEEKQVSTAIRSISAAKPCEELDVRKSCESVPKARNPSSIRRLSFTMGKMMKNASSRDNSPLRRSSSKDCIAKSGSEGTTGVSSIDNPCNDKST

Click here to download the sequence:
Link to NCBI Protein BLAST