Transcript Information: R_Transcript_39404.p1


Annotated TAIR IDAT2G46160.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18963109-18963753 | Forward length=214
E-Value6.2E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.234200296132
Replicate 211.610857373068
Replicate 312.245076318681
Condition 2: 8 Hour
Replicate 19.365561247103
Replicate 29.2740984594779
Replicate 311.543420578864
Condition 3: 24 Hour
Replicate 115.023081227346
Replicate 211.180085151905
Replicate 315.028884785012


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39404.p1 GENE.R_Transcript_39404~~R_Transcript_39404.p1 ORF type:complete len:217 (+),score=14.00,zf-RING_2|PF13639.2|1.8e-11,zf-rbx1|PF12678.3|6.7e-07,zf-RING_11|PF17123.1|6.7e-07,zf-RING_11|PF17123.1|6.3e+03 R_Transcript_39404:169-819(+)
ATGTCCCCTCCTCCCTCATCATCATCATCATCATCATCATCATCAATCTCTTTCTCTCTCAAGAACCTGGGTCTGGGTTATGCTATAGCCATAGCCTTCGGTTTCCTAGTTCTCTTCTCAACGCTCCTCCTCTCCTCCTACCTCTGCTGTCGCACCCGCCATCGCCGCCGTCTCCACGCGCCGCCTCTCTCCTCCACCTCCGACGGCGGGATCATCGTCCCGAGGATCATCTTCGTGGCCGAAGACGACGAAAACGACGAAGAGAATCAGAACAGGGGAGGCTCAGTAAACGGCGTCGTTGGGCTTGACCGTGCTGTCATCAACTCCTACCCCAAGTTCCAGTTCTTCAAGAAAAATCTTGTTCAGAGTAGTGGAGATAACAATAATGATGGGAGTGGAGATAGTAATAATACGATGTGCTCCATTTGTTTATGTGATTATAAGGAAGGAGAGATGCTGAGAATGATGCCGGATTGTAAGCATTATTTCCACCTATGCTGTCTTGACGCGTGGCTTAAACTCAACGGCTCTTGTCCCGTTTGTCGGAACTCCCCGTTACCTACGCCTGTTTCGACGCCGTTAGCTGAGGTTGTCCCTCTTTCTCACTACCCCGATAATCGTCGCCGTTCTACTGTCATCTCTTCTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39404.p1 GENE.R_Transcript_39404~~R_Transcript_39404.p1 ORF type:complete len:217 (+),score=14.00,zf-RING_2|PF13639.2|1.8e-11,zf-rbx1|PF12678.3|6.7e-07,zf-RING_11|PF17123.1|6.7e-07,zf-RING_11|PF17123.1|6.3e+03 R_Transcript_39404:169-819(+)
MSPPPSSSSSSSSSSISFSLKNLGLGYAIAIAFGFLVLFSTLLLSSYLCCRTRHRRRLHAPPLSSTSDGGIIVPRIIFVAEDDENDEENQNRGGSVNGVVGLDRAVINSYPKFQFFKKNLVQSSGDNNNDGSGDSNNTMCSICLCDYKEGEMLRMMPDCKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPVSTPLAEVVPLSHYPDNRRRSTVISSS*

Click here to download the sequence:
Link to NCBI Protein BLAST