Transcript Information: R_Transcript_39416.p1


Annotated TAIR IDAT3G48480.1
Annotated Gene NameCysteine proteinases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:17957326-17959062 | Reverse length=298
E-Value9E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8227087063755
Replicate 28.7654458048623
Replicate 39.0070181810114
Condition 2: 8 Hour
Replicate 15.4677174154043
Replicate 24.4504667742166
Replicate 32.9077822838484
Condition 3: 24 Hour
Replicate 15.6837289738491
Replicate 23.5331239970342
Replicate 35.6313026621629


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39416.p1 GENE.R_Transcript_39416~~R_Transcript_39416.p1 ORF type:complete len:206 (+),score=17.85,Peptidase_C48|PF02902.15|2.9e-07 R_Transcript_39416:2667-3284(+)
ATGTTTTTGTTCCTATTGTTTGCTGGGATCACTGGAGACTTGCGATTTTCTGCCATTTTGGTGAGGATGAAGACTCAGAGACCAGAACACGGTGCATCTTGTTGCTTGATTCAGTTGAGATGGGTGCACGGGAAATTGAAGCTGATATTAGAAAGTTTGTTTTTAACCTGTTTGGGTCTGTCTTTTATGATTGTCGGAATGATTGATGAAAATCTATCTGTGTTCTTATGTATCTGTAGGTTTGTCTTTGATATTTTTAAGGCAGAGGGCAGACCAGAAATCAAGGACGACATCTACCAAATTCCTTTGCTGATACCTGAGGTACCCCAGCAGAGAAACGATGTGGATTGTGGCAGATTTGTCCTCTACTTCATCGAACAGTTTGTGCATGCCGCTCCAGAAAATTTTAGCATTTCCAATGGTTATCCCTATTTCATGGAGCCGGACTGGTTCAATCCCGAGAAGTTTGAGGATTTCTGTAAGAAACTTGACCAGGAGTTACCCAGACAAGCACGACGGATGGGAGCACCAAGAAGGTTATCTCAAAGGATCAGAAAGGCAACGGTCATTTCACAAAAATTTTCGAGGCAAAAATTTGAAGTGATTTCGATAGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39416.p1 GENE.R_Transcript_39416~~R_Transcript_39416.p1 ORF type:complete len:206 (+),score=17.85,Peptidase_C48|PF02902.15|2.9e-07 R_Transcript_39416:2667-3284(+)
MFLFLLFAGITGDLRFSAILVRMKTQRPEHGASCCLIQLRWVHGKLKLILESLFLTCLGLSFMIVGMIDENLSVFLCICRFVFDIFKAEGRPEIKDDIYQIPLLIPEVPQQRNDVDCGRFVLYFIEQFVHAAPENFSISNGYPYFMEPDWFNPEKFEDFCKKLDQELPRQARRMGAPRRLSQRIRKATVISQKFSRQKFEVISID*

Click here to download the sequence:
Link to NCBI Protein BLAST