Transcript Information: R_Transcript_394199.p1


Annotated TAIR IDAT2G17210.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:7485398-7487602 | Reverse length=715
E-Value3E-85
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3491003461285
Replicate 20.28683470514068
Replicate 30.31293357371793
Condition 2: 8 Hour
Replicate 10.33450635173832
Replicate 20.24438122230804
Replicate 30.19837825814631
Condition 3: 24 Hour
Replicate 10.12545249851204
Replicate 20.30130135096417
Replicate 30.29901235911062


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_394199.p1 GENE.R_Transcript_394199~~R_Transcript_394199.p1 ORF type:complete len:366 (+),score=63.62,PPR|PF01535.16|8.8e-05,PPR|PF01535.16|5.4e-05,PPR|PF01535.16|3.1e+03,PPR|PF01535.16|0.23,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|0.16,PPR|PF01535.16|0.69,PPR|PF01535.16|4.6e+03,PPR|PF01535.16|7.9e+03,PPR_2|PF13041.2|0.002,PPR_2|PF13041.2|3e-05,PPR_2|PF13041.2|2.2,PPR_2|PF13041.2|5.2e-10,PPR_2|PF13041.2|18,PPR_2|PF13041.2|27,PPR_3|PF13812.2|0.003,PPR_3|PF13812.2|0.061,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|5.7e-05,PPR_3|PF13812.2|54,PPR_3|PF13812.2|0.2,PPR_1|PF12854.3|0.0063,PPR_1|PF12854.3|0.00055,PPR_1|PF12854.3|97,PPR_1|PF12854.3|0.00062,PPR_1|PF12854.3|2.1e+02,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|0.36 R_Transcript_394199:106-1098(+)
ATGGATAGAAGGGATACAGTTACATGGGCCACGATGATTGGGGGATTCGCCTTTTGTGGCATGCCTAATGAGGCAATGATTGTATTTCGACAGATGACTGAAACTGGCGAGAGAGTTAATACAGTTATAGTCATAAACCTGATTGAAGCATGTTCTGTTTTTGCTGAACTAAACAGATCTAAATGGGCGCATGGAATTACCATTAGAGGTGGCTTTTCTGGGGAGGTATCTGTAGGAACCGCAATAGTAGATATGTACTCGAAATGTGGGGCAGTAGAAGAAGCAAGAAAATCATTCGAGCAAATACCCCAGAAAAACATCATGTCATGGAGTACTATGATATCTGCATTCGGCATGAATGGTAGAGCCCAAGATGCATTAAGTCTAGTTACAGAAATGAAGTCACATGGTTTGAAACCAAATGCAGTTACAGCTCTTTCAGTCCTAGCTGCTTGTAGTCATGGTGGTCTTATTCACTCTGGCCTATCCTTCTTCAAAGAGATGGTTGAAGATCTTGGGATTCAACCGGGGTTAGAGCATTATGCTTGTTTGGTTGACATGTTGAGCCGGTCAGGAAAGTTGGACAATGCCATGGACTTGATCAAAAGTTCCGGAGAAAATGTTGCAAGCAAGGCGAGCATTTGGGGGGCGGTGCTATGTGCTAGCAGCAGGTACAAGAACTCTGAGATTGGCGAAGGCGCAGCTTCTCAAGTACTTGAATTGGAACCTTTTGTTTCGTCTGGATACATGCTAGCATCAAGCTTGCATGCTGGCATGGGATCATGGACAGATGCAGCGAAGATCCGAAGGCTGGTGAAGGAGAGAGGAGTTACAGTAATAGCTGGTTATAGCATGGTCCGTGTAGATGACAAGGCTTTTAAGTTTGTAGCTGGAGATAAGGGCATGCCACTGGCTGCTCACAGTTGCTCTATTGTTGAGCAATTGCACAGATGTATGCAGCCTGACGACAATAGTGAGGAAGTTGTTCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_394199.p1 GENE.R_Transcript_394199~~R_Transcript_394199.p1 ORF type:complete len:366 (+),score=63.62,PPR|PF01535.16|8.8e-05,PPR|PF01535.16|5.4e-05,PPR|PF01535.16|3.1e+03,PPR|PF01535.16|0.23,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|0.16,PPR|PF01535.16|0.69,PPR|PF01535.16|4.6e+03,PPR|PF01535.16|7.9e+03,PPR_2|PF13041.2|0.002,PPR_2|PF13041.2|3e-05,PPR_2|PF13041.2|2.2,PPR_2|PF13041.2|5.2e-10,PPR_2|PF13041.2|18,PPR_2|PF13041.2|27,PPR_3|PF13812.2|0.003,PPR_3|PF13812.2|0.061,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|5.7e-05,PPR_3|PF13812.2|54,PPR_3|PF13812.2|0.2,PPR_1|PF12854.3|0.0063,PPR_1|PF12854.3|0.00055,PPR_1|PF12854.3|97,PPR_1|PF12854.3|0.00062,PPR_1|PF12854.3|2.1e+02,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|0.36 R_Transcript_394199:106-1098(+)
MDRRDTVTWATMIGGFAFCGMPNEAMIVFRQMTETGERVNTVIVINLIEACSVFAELNRSKWAHGITIRGGFSGEVSVGTAIVDMYSKCGAVEEARKSFEQIPQKNIMSWSTMISAFGMNGRAQDALSLVTEMKSHGLKPNAVTALSVLAACSHGGLIHSGLSFFKEMVEDLGIQPGLEHYACLVDMLSRSGKLDNAMDLIKSSGENVASKASIWGAVLCASSRYKNSEIGEGAASQVLELEPFVSSGYMLASSLHAGMGSWTDAAKIRRLVKERGVTVIAGYSMVRVDDKAFKFVAGDKGMPLAAHSCSIVEQLHRCMQPDDNSEEVVQ*

Click here to download the sequence:
Link to NCBI Protein BLAST