Transcript Information: R_Transcript_39442.p1


Annotated TAIR IDAT1G33710.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:12219657-12220289 | Forward length=210
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.57524110729584
Replicate 30.47068638896204
Condition 2: 8 Hour
Replicate 10.33542280749651
Replicate 20.45947017481888
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.90638050235249
Replicate 30.59966314210678


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39442.p1 GENE.R_Transcript_39442~~R_Transcript_39442.p1 ORF type:complete len:146 (-),score=22.12,zf-RVT|PF13966.2|2.4e-08,zf-RVT|PF13966.2|4.2e+03 R_Transcript_39442:100-537(-)
ATGAAAATAAAGGAGATTTACAAAAGGCTGCAGGGCGACTTTGTGAAGGTAGAGTGGAAGAACCTGATCTGTAACAATGCTGCAAGGCCCAAAGCGTGCTTCTCTTTGTGGCTGCTGCTGCTACAAAGGCATTCTACTAAAGATAGGCTCTACAGGTGGGGGATTAACTGTGACAGGACCTGTGAACTCTGCAAAACTCTCTCTTGGCATCAAGGTCTTCAATGGATGATTAAACATGGAAAAGGAAAATCTTCAACTGCGAAGATGTTTCGAATGATACTTGCTGAACTTTGGTATGCTATCTGGAATGAAAGGAATAATCGAGTCTTTGTGAAGAAGGAGCAAACACAGAGTAGTCTAATTAAAACTGCTATGTATGCTGTGGCCATCAGAGGCTATATGTACCCAAAGCTTAGTGAGTGTTTGAATAGTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39442.p1 GENE.R_Transcript_39442~~R_Transcript_39442.p1 ORF type:complete len:146 (-),score=22.12,zf-RVT|PF13966.2|2.4e-08,zf-RVT|PF13966.2|4.2e+03 R_Transcript_39442:100-537(-)
MKIKEIYKRLQGDFVKVEWKNLICNNAARPKACFSLWLLLLQRHSTKDRLYRWGINCDRTCELCKTLSWHQGLQWMIKHGKGKSSTAKMFRMILAELWYAIWNERNNRVFVKKEQTQSSLIKTAMYAVAIRGYMYPKLSECLNSL*

Click here to download the sequence:
Link to NCBI Protein BLAST