Transcript Information: R_Transcript_39443.p2


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value8E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.25850730452238
Replicate 30.20984520948424
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.12651852420172


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39443.p2 GENE.R_Transcript_39443~~R_Transcript_39443.p2 ORF type:complete len:173 (-),score=15.34,RVT_1|PF00078.23|1.8e-33 R_Transcript_39443:1307-1825(-)
ATGTGGAGAGCTGTAAACTCTACCTTGATTACCCTCATCCCAAAAGTTTCCCAACCTAACACTATAAAGGATTTTAGACTTATTGCATGTTGTTCCACGTTATATAAAATTATTGCAAAGGTCTTAACAACTAGATTAAACAAAGTGTTGGGTAGCATTGTTGGTGCACCTCAGTCTGCGTTTGTTCCAGGGAGGCAAATTGGTGATAATATTCTGTTATGCCATGAACTAGTCAAAGGCTATGGAAGAAAGCACTTATCCCCCAAATGTATGATGAAAATCGATTTGCAAAAGGCCTATGATAGCCTAGAATGGGGTTTCCTACATCAGGTGATGATAGAAATGGGTTTTCCTCCCCTTTTTCTGAAGTGGATTATGTGTTGTCTAACTACAATAAGCTATGTGCTAAATGTCAATGGTGAATTACAAAAACCTTTTGAGGTAAAGAGAGGGTTATGCCAAGGTGATCCCCTCTCCCCAGCTCTGTTTGTCATTGCTATGGAATACCTGTCAAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39443.p2 GENE.R_Transcript_39443~~R_Transcript_39443.p2 ORF type:complete len:173 (-),score=15.34,RVT_1|PF00078.23|1.8e-33 R_Transcript_39443:1307-1825(-)
MWRAVNSTLITLIPKVSQPNTIKDFRLIACCSTLYKIIAKVLTTRLNKVLGSIVGAPQSAFVPGRQIGDNILLCHELVKGYGRKHLSPKCMMKIDLQKAYDSLEWGFLHQVMIEMGFPPLFLKWIMCCLTTISYVLNVNGELQKPFEVKRGLCQGDPLSPALFVIAMEYLSR*

Click here to download the sequence:
Link to NCBI Protein BLAST