Transcript Information: R_Transcript_394449.p1


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 12.6135517756714
Replicate 22.7652029702329
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_394449.p1 GENE.R_Transcript_394449~~R_Transcript_394449.p1 ORF type:complete len:1994 (-),score=184.22,Mononeg_RNA_pol|PF00946.15|3e-159,Mononeg_mRNAcap|PF14318.2|1.4e-20 R_Transcript_394449:310-6291(-)
ATGGAGTCTTTCCTCGATAATGAAAGAGACATCGAGTCTGTCAACGATGATCCGATGCTCATTGACTTCCATCTCGGAAATGCATTGAACCTTGACATAGTGAGAGCCCTGGTCCTCAATGTCCGTCCTGAATACGACCTTTACATACCAAGGTTTCAGAGAGACGCCTGGGATTCTCTTAGTAGAGCAATTCCGTACTCATACAAGCTTGATGTGGGGTTTCTCAATCCGACATGTGATATGCTGTCAAATATGAATGGACGATGGACCCAGCTGACCCCGAAACTCTGGAAGACGCTTGCGTCCATAGTTATAAGGGGACTCCAGCAAAAGGACATTCAAATCCCAATATCCGACTATCAAAGAAGCGTTAGATCCATTCATGTTATGATTCCCGATATCTGGAGCATTGTATTTAACATGACCCTGGCTGCCATATCTGCTCTCTCTGAGATCCTTCGCGGCGGGGATAGCTCTCCATATGCTAATGTATCTGTTGAGGGAGATCATGTCCTGGTCAATCTGATTCCTGGGAGTGATATCCTCCTGATTGTTGGGAGAAACATGGCTGCCATCGTTGACCACCAAAATCGAACAACATACATAGGGAATTATGACTCTGTATTGCTGCTCATGGACACCGTAGGACAAAGGATCTGTTCCCTAATCGGGCTGCAGATAGCCTCACCGTATGAGATATCAGGATGTGTCAGAATTCCGCAGATGATGAGAGTCATTAAGATTGGCGATCAAATTTTGAAGCTCAACGGAAATCTCGGGTATGAGGTCATTGCAATGTTCGAAGCATATGTTGTCTCCATAATCCTCCAGAAGAACCCCGACAATATATCAAACGGACGGGAATTTTATGAGAATTGCATCCAGGAGTCCACAGAGCTATGCAGTGAACTTCCAGAGAATCTAAGGACTCTTGAGCTGATTGAAGAGTGGATCCGATTGTTGTCGACGATGGCTCCTGACCATCTATCAAATATATTCTGCTTGTATAGAATCTGGGGACATCCTGCTGTCGATATAAAAGCTGGGATGAAGAAGGTGTATGATAAAGCTATGGCACCAAAGGTTACAATGAATCTGTCAGAGGGACTCGCTTTATGTCAATTTCGTCACATGTTCTTGCAGAGCTACCTCTCAAAGCACAGACAGTATCCCGATATGGATATCACTGGCACTGGATATGTGCAGGACTGCCTCAGGCGGGGATATCCAGTTGACCAAAAGAGATCTGATTATTGTCTCCTGGATTATCTAAGTGTGAACATTAATCAGATATGGACAGTGCCTGAGACATATGACATATGTCACATTCTCAATGATAAGGCAGTCTCTCCCACAAGGTCTGAGCTTTATGAATCGGTAGCTGCAGGAAAAGGAACTGTGTTCGGGACCATGAGACGAGGGATCATAAGATGGATGGAGGGAGATAGTATAAGATGCAAGGAATTTCTAGAGCATATTGACTCAGAGGGGTTAGAGGATGATGACATGATCATAGGGATGTATGAGAAGGAAAGAGAGATAAAGGTGAAAGCACGGATGTTTAGTCTGATGTCTGAGAAGATGAGAATGTATGTGGTGCTCACGGAGGAACTTATTGCCAACCACATTCTCCCATACTTTCCTGAAATAACTATGAAAGATCCGCTCAATGTTCAAATCAGAAAGATATGGAAGGTGGGCGGATCAGGGCAGTATGAGAATAATCCCAATATTAACATTGATTTTGAGAAATGGAATCTGAATATGAGGCCTCAATTTACTAATGGCTTATTTCTTCAGATGGATAGGATGTTTGGCTTTTCCAACCTCATATTCAGGACTCATGAGATATTTGAGAGGTCTTATGTTTATTCATGCTCTGGGAAATATGTTCCTCCTATTAACACGGAGGGGTTTGTCTCAGATGCCCCTATGGCGTATATCGGACACAAGGGTGGTTTTGAGGGGCTGAGACAAAAGGGATGGACAGTTGCTACCGTATGCCTCCTTGCGTACACTGCATTTCAGCTCAAGATAGACATGCAGCTCTTAGGCCAAGGAGACAATCAGGTTATAAAGCTCTACATGCCTACAAAAAGATGGGACAACCTTTGTTACACTGACGACGCTAAGAAAAAGGAGTCAAAGGCGCTAACCGACGAGTACATTCGGTTAATGAGGAAGAACTTTGATGATGCAGGGCTTCCAATCAAAGTTAGGGAAACTTGGATCTCTACTCGACTCTTCATGTATGGAAAATCGATGTACTTGGACGGAAAGTGCCTACCACAATGGATGAAAAAGTTGTTGCGGTCCTATGCCTTATCAAATGAGGGGTCTGTAACAATCTCCGGGGTCATCGGTACCATAGCTACCAACATGACATCCGCTGCAGGAGTGTCAGAGGCCCCAGATGTCATGTATCTGATATATCTCTTTCTCGGAGAATGGTCATTAGAGTATCTCCTCAATTATCATCCATTTACCAGAGAGAGGATAGTCCAAGGGTCAATCAGGGAGTTTAAAATCCCTGGAAGGAGTCAAAAGCTAAGATCTGAGCCAACATCCATTCATAGGCTAATATCATCCCTGCTGCTAGTCCCGACTGCGGTGGGAGGGAATGTGACGATCCCGCTAACAGGATTTATATGTAGGGGGTTTCCTGATCATGCAAGTGAGGGATATGCGTGGCTCAACCTACTGAGGTCTGTTGAATCTCCATATCAGAGGATGTTCGACAATTGGTACTCATTCATCAAGAATGACACTGTGCAATGTGACATGCTTGTCCAATCGCCATGGAGCTTAAATCACCTAAAGCCTCCTACTCCAGGGTTGCAAAGCAGAGAGATGGTCAGGGATTGGCTCCTATCAGGAAGATTTGGAAATAATAGATTCTTGGCAAATATTGCAGAGATCAACAAGGCATTTCCTCGGAAGGGAATTTGCAAAGAGCTAATGTCTGATCCAATAAATCCACTCATTATTTATGAGATATTTAACGCATTCCCCCATTCTTACTATGACAGTATATTAAGGAGGTTTGAAGGGACGAGATCAGTGCGTAAACTTGCGATGAGAGAGAGCTACACTAAGCCCATAATAAGCATGCTGATGGAGGTTGAGGTCAGGCATCTTGATTACATGATATGGAGAGCGGAGATGAGAGGTGAAGAGTTCTCTAAATGTGCAACCCAGCAAGCTAGAATGGCGAGGGACATAGGATGGGAAAGGAAAATCAACGGACTCACAACCCCGCATCCTATCGAGTATCTTTTCAATAGCACCTGTCATGGATTCAATCCGACATGTGATGGAAGCGATTACATCCTAGTGAGGCATGATCCAAAAGGAGAGTACCCTCCTTATCTAGGCTCCAGGGTTAAAACAAAAGTTGTGAGCCTACAGGACGAGGGAGCCCGATCTGAACCTCTTATATGCGCTAATGCCAGATTGGCCAGATATTTAAAATGGCTCAATATGGGGGACAACCTCATTGGTGTTGTGAAGCAAAGTACTGAGTCATTATGTGACACTAACATATTCGACAATTTTTATGATGTGACTCCAGGCGCTGAGGGTTACACAGGATGTTCCGAACATAGATTTAATCCTGCCGCAGCATCTGACGGATGCTTCATAAATTATGCTCCTCAACTTGGGTCCAAAGTGTACATGTCTGGAGATTATATGCCTCAGTACGGGAAGGGAAAGGACAACTACACCATCCACTTTCAGGCAGTTTACTGTTTTCTCCAATATATCGCCGCCCGACGATCTGAATGTACATCAGTACACCATCACATATCATGCAACACATGTGTAGTCAAGTGTGATGACACAATATCAGACATATCCCCAGATCATCCTAAAATTGACTTTGCATTCAATGAGACAACATCGGCACTGCTAAGAGACACCATAGGATTCATAAAAGAAAAGCCCAAAGTCCACATGTCTAAAAGAGATTACCTTGCATTGGACAATGAGGTCCCCTTTGACCCATCCACTCTGAGTACGACAGGATGTTATTATGGTCTCGTGTACACACTGTCAACAAAATGTGCTCTGTCTATGCTAAGCAAAGCTGGAGACACCGATGCTATGAATATAGAGGACCTGCAGTCTTTTCCGAGGGTTTACTCATACAAATTATATGTTGATCACATTATGGATGCAGTCAGCAATATTCTCCTATACATGTTCATAATGAGACAAAGAGAGCCTGTTAACACAATCGGAATAACAAAGGCAAAAAGAGGCCTGTTGAGATTCTTGGACAGGACTCCCATAGGAAAGTTCAAGGAAATTGCCAGTTTGTGTGTTGGCAGGAAATCTAAATGCGGAAAGACTAGATATAGAATTCCTACTGGATGTTTTCCGGATGATGTGCCATCCTTTCTGAGAGGAGTGAAGAACTGTCTCATTGATGTCATCACAGAGGTGTCAGGATTTAATGTCAACTACCCAAAGAATATGTATATAGGAAAGCTCGGAATCACTGAGAAGGAATACCGCGTAATCTTAGGGATGAATGGGGTTGTCAGGCATAAGTGTTTGTCCTGTGGAGAGATCATGTGGGATGACAATCCGATTGGCTCAGGTTCCTGCCGAGCAGGACATATGGAGATGATATTGGATCAAGTCCGGCTGACACCTGCCTCTCTTGATAGGATGTCAAAACTGTTGACTATAAAGTCTCAGGTTCGACTCTGTGATGGATTGGAACTCCCGATCATTCAATCCACCATGGCGAAGAGGATCTACAGACAAGACATGTCTGTCTGGGTGGATGAAAAACCAAAAGCCCTCAGAAAAATCAACCTCCCAACAGCGAGTCTTTACAAGTGGACTGCGGCTCTATCACGGGTGAAGCCAGACATGTATGATGTTGTTATAGTGCTTGGGGACGGAACCGGAGGAACATCTATGCTTGCTGCCCAGCATTTTAAAAATGCGATCATTTTCCCATTGGCAAAGTTTGAAAGACAGAAGATGATCCCTCAAGACTCAGACTCTATTCATCCTTTTCTGTCCAGAGGCTATCCCAATGTCAGGTATGATCTACTAGAAGCAATCCCTGATGACATTTGTACAAACATCTGGGACATAGAGTTCAAGGCAGCCCTCGGAAGAATGGAAGGGAGCATTCTCTTGCTATCTGATATAGAGGGGCTGCAGAGCGGAGAGATAGTTGATAGGATCAGACTGGCTGCAGAGATCCCAACCGTAGATGTCCTCATTAAGGTATACTATGAGCAGATCACAGACCAACACATAGACTGGATTCCGTATCTCATCCAGACGGTTCATGCTAATATAGACTATAAGGAAGAATTTATAACATCAATTCCTTGGAACTCGTCTGGAGAAGATCATCAATCAACAAAGATAGGTCAGACTCTCGTAGAGAAAGCATTCCATAATGCTGTGAGCCTGTCTTGGGCTCTCGCGAGACACAAGCTGTCGGCATTGGGGATATCTATAGGGAAAGAGCTGTTATTGGGAAGACCTGATCATCTTATGGTCTCCTTGATGGGTCATATCAACTCTAGGTATAGATTTCCTCAGGACAAGATTAGGGCATATGATCCAAGGAACATTACAGACGGAGTCCTCAGGAAAATCGTTCGATCTGTCAAGATAATTATACTGTCGTACTCATCTGAGGACACTGTTGAGAAGGAGTGGTTTCAAAAGATGACCCTGGCTCATGCCGCCAAATTTGATAGAGATAGATCATATGTCACAAGACGCATTAATTTGGCAGTCAGCGATAAGATAATATCCAGTATTACTCATGAGGATCAGTTAGTTGCTCGAACGATAAGAGGACACAGAAGACGGCTGTATGTAATAGACAAATTCCATGACTTGTTGCAGCTGTGTAAAACAAAGATGAGCATTCCCATAGATGCATCAGATATGATCATAGAGTCGGAGTCAGTCGAGACAGCATCAGACATCTCTTATGGAGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_394449.p1 GENE.R_Transcript_394449~~R_Transcript_394449.p1 ORF type:complete len:1994 (-),score=184.22,Mononeg_RNA_pol|PF00946.15|3e-159,Mononeg_mRNAcap|PF14318.2|1.4e-20 R_Transcript_394449:310-6291(-)
MESFLDNERDIESVNDDPMLIDFHLGNALNLDIVRALVLNVRPEYDLYIPRFQRDAWDSLSRAIPYSYKLDVGFLNPTCDMLSNMNGRWTQLTPKLWKTLASIVIRGLQQKDIQIPISDYQRSVRSIHVMIPDIWSIVFNMTLAAISALSEILRGGDSSPYANVSVEGDHVLVNLIPGSDILLIVGRNMAAIVDHQNRTTYIGNYDSVLLLMDTVGQRICSLIGLQIASPYEISGCVRIPQMMRVIKIGDQILKLNGNLGYEVIAMFEAYVVSIILQKNPDNISNGREFYENCIQESTELCSELPENLRTLELIEEWIRLLSTMAPDHLSNIFCLYRIWGHPAVDIKAGMKKVYDKAMAPKVTMNLSEGLALCQFRHMFLQSYLSKHRQYPDMDITGTGYVQDCLRRGYPVDQKRSDYCLLDYLSVNINQIWTVPETYDICHILNDKAVSPTRSELYESVAAGKGTVFGTMRRGIIRWMEGDSIRCKEFLEHIDSEGLEDDDMIIGMYEKEREIKVKARMFSLMSEKMRMYVVLTEELIANHILPYFPEITMKDPLNVQIRKIWKVGGSGQYENNPNINIDFEKWNLNMRPQFTNGLFLQMDRMFGFSNLIFRTHEIFERSYVYSCSGKYVPPINTEGFVSDAPMAYIGHKGGFEGLRQKGWTVATVCLLAYTAFQLKIDMQLLGQGDNQVIKLYMPTKRWDNLCYTDDAKKKESKALTDEYIRLMRKNFDDAGLPIKVRETWISTRLFMYGKSMYLDGKCLPQWMKKLLRSYALSNEGSVTISGVIGTIATNMTSAAGVSEAPDVMYLIYLFLGEWSLEYLLNYHPFTRERIVQGSIREFKIPGRSQKLRSEPTSIHRLISSLLLVPTAVGGNVTIPLTGFICRGFPDHASEGYAWLNLLRSVESPYQRMFDNWYSFIKNDTVQCDMLVQSPWSLNHLKPPTPGLQSREMVRDWLLSGRFGNNRFLANIAEINKAFPRKGICKELMSDPINPLIIYEIFNAFPHSYYDSILRRFEGTRSVRKLAMRESYTKPIISMLMEVEVRHLDYMIWRAEMRGEEFSKCATQQARMARDIGWERKINGLTTPHPIEYLFNSTCHGFNPTCDGSDYILVRHDPKGEYPPYLGSRVKTKVVSLQDEGARSEPLICANARLARYLKWLNMGDNLIGVVKQSTESLCDTNIFDNFYDVTPGAEGYTGCSEHRFNPAAASDGCFINYAPQLGSKVYMSGDYMPQYGKGKDNYTIHFQAVYCFLQYIAARRSECTSVHHHISCNTCVVKCDDTISDISPDHPKIDFAFNETTSALLRDTIGFIKEKPKVHMSKRDYLALDNEVPFDPSTLSTTGCYYGLVYTLSTKCALSMLSKAGDTDAMNIEDLQSFPRVYSYKLYVDHIMDAVSNILLYMFIMRQREPVNTIGITKAKRGLLRFLDRTPIGKFKEIASLCVGRKSKCGKTRYRIPTGCFPDDVPSFLRGVKNCLIDVITEVSGFNVNYPKNMYIGKLGITEKEYRVILGMNGVVRHKCLSCGEIMWDDNPIGSGSCRAGHMEMILDQVRLTPASLDRMSKLLTIKSQVRLCDGLELPIIQSTMAKRIYRQDMSVWVDEKPKALRKINLPTASLYKWTAALSRVKPDMYDVVIVLGDGTGGTSMLAAQHFKNAIIFPLAKFERQKMIPQDSDSIHPFLSRGYPNVRYDLLEAIPDDICTNIWDIEFKAALGRMEGSILLLSDIEGLQSGEIVDRIRLAAEIPTVDVLIKVYYEQITDQHIDWIPYLIQTVHANIDYKEEFITSIPWNSSGEDHQSTKIGQTLVEKAFHNAVSLSWALARHKLSALGISIGKELLLGRPDHLMVSLMGHINSRYRFPQDKIRAYDPRNITDGVLRKIVRSVKIIILSYSSEDTVEKEWFQKMTLAHAAKFDRDRSYVTRRINLAVSDKIISSITHEDQLVARTIRGHRRRLYVIDKFHDLLQLCKTKMSIPIDASDMIIESESVETASDISYGE*

Click here to download the sequence:
Link to NCBI Protein BLAST