Transcript Information: R_Transcript_394509.p1


Annotated TAIR IDAT4G25580.1
Annotated Gene NameCAP160 protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:13056320-13058657 | Forward length=626
E-Value4E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.26245375520373
Replicate 30.14316710997595
Condition 2: 8 Hour
Replicate 12.9076964624854
Replicate 24.8914429027593
Replicate 35.5589307524935
Condition 3: 24 Hour
Replicate 12.0088081324241
Replicate 22.7569073613222
Replicate 32.8727612401553


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_394509.p1 GENE.R_Transcript_394509~~R_Transcript_394509.p1 ORF type:5prime_partial len:160 (-),score=48.95 R_Transcript_394509:218-697(-)
CCGGTCTATGAGAAGGCAGCAGAGGTAGGGTCAACCTTGGCCTTGAAGATGCAAGGGTCTAAGACGGAGCATGGGATGGGGACCGCAACAAATGTGCCTGACAAGGGGGTTTCAGTGAAGGAGTATCTGGCCGAGAAGCTGAGGCCTAGTGAAGAGGACAAGGCATTGTCTCAGGTCATCACTGAAGTGTTGCCGTTGCACAAGCAAAAGGACGAGGCAACCAAGCAAGAAGAGGAAGGGAAGAAAGTTCTCACTAAAGGGCGAGTAACCGAGTCCGAGGAAGTGAGAAACAGGCTTGGTGGCTTCGATGAGAGGAGTGACGAGAATGTCGGGTCAGGGGAAGCTAGTCCAGGGAGGGCTGTGTTTGACAGGATCAAAGATGCAGCTACTTCCTGGTTCGGCAAGGGTGGCGAGACGCAGCCGATAGCAAAAGGTCACATGGACACTTCAGAAGGAAAGGAAACTGAGAGGACACAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_394509.p1 GENE.R_Transcript_394509~~R_Transcript_394509.p1 ORF type:5prime_partial len:160 (-),score=48.95 R_Transcript_394509:218-697(-)
PVYEKAAEVGSTLALKMQGSKTEHGMGTATNVPDKGVSVKEYLAEKLRPSEEDKALSQVITEVLPLHKQKDEATKQEEEGKKVLTKGRVTESEEVRNRLGGFDERSDENVGSGEASPGRAVFDRIKDAATSWFGKGGETQPIAKGHMDTSEGKETERTQ*

Click here to download the sequence:
Link to NCBI Protein BLAST