Transcript Information: R_Transcript_39466.p1


Annotated TAIR IDAT5G26751.1
Annotated Gene Nameshaggy-related kinase 11
Annotated Gene Symbol(s)ATSK11, SK 11
Annotation TypeOrtholog
Chromosome Positionchr5:9399582-9401839 | Reverse length=405
E-Value3E-153
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 146.481377314923
Replicate 219.531442247719
Replicate 334.360106394229
Condition 2: 8 Hour
Replicate 127.04833918591
Replicate 227.821097174498
Replicate 341.579852235073
Condition 3: 24 Hour
Replicate 148.229191927967
Replicate 236.160366320598
Replicate 341.654507756847


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39466.p1 GENE.R_Transcript_39466~~R_Transcript_39466.p1 ORF type:complete len:258 (+),score=27.52,Pkinase|PF00069.21|4.1e-36,Pkinase_Tyr|PF07714.13|1.3e-18 R_Transcript_39466:143-916(+)
ATGGCTTCAGTGGGGATCGCTCCCACGTCTGGAATCAGAGAACCTGGTGGCAACACCGGTGCTATCGATAAGCTGCCCGATGAGATGAATGATATGAAAATAAGAGATGATAAGGAAATGGAAGCTGCTATAATCGACGGAAATGGGACCGAGACTGGTCATATCATTGTTACAACCATTGGTGGTAGAAATGGCCAACCTAAGCAGACAGTAAGCTATATGGCTGAGCGTATTGTTGGACAAGGGTCGTTTGGAGTTGTGTTTCAGGCAAGGTGCTTGGAGACGGGTGAAACTGTAGCCATAAAGAAAGTCCTTCAGGACAAGAGGTACAAGAACCGTGAGTTGCAAACGATGCGTCTCCTAGATCACCCAAATGTTATTTCCTTGAAGCACTGCTTCTTTTCTACAACTGGAAAGGATGAACTCTATCTTAATTTGGTGCTTGAGTTTGTCCCTGAAACTGTTCATCGTGTCATCCGACACTACAACAAGATCAACCAAAGGATGCCTTTGATATATGTAAAGCTCTACACATACCAGATTTGTCGAGCATTGGCCTACATTCACGGAACTATCGGAGTATGCCATAGGGATATAAAACCTCAAAACCTATTGGTTAATCCGCATACACATCAGTTGAAAATTTGTGACTTCGGAAGTGCTAAAATCCTGGTAGTGGTGAAAAGAGAGCCAAACATGTCGTATATATGCTCTAGGTATTACCCGTGGTCCAAAACTTATATTTGGAGCAACAGAGTACACCACAGCAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39466.p1 GENE.R_Transcript_39466~~R_Transcript_39466.p1 ORF type:complete len:258 (+),score=27.52,Pkinase|PF00069.21|4.1e-36,Pkinase_Tyr|PF07714.13|1.3e-18 R_Transcript_39466:143-916(+)
MASVGIAPTSGIREPGGNTGAIDKLPDEMNDMKIRDDKEMEAAIIDGNGTETGHIIVTTIGGRNGQPKQTVSYMAERIVGQGSFGVVFQARCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVISLKHCFFSTTGKDELYLNLVLEFVPETVHRVIRHYNKINQRMPLIYVKLYTYQICRALAYIHGTIGVCHRDIKPQNLLVNPHTHQLKICDFGSAKILVVVKREPNMSYICSRYYPWSKTYIWSNRVHHSN*

Click here to download the sequence:
Link to NCBI Protein BLAST