Transcript Information: R_Transcript_39467.p1


Annotated TAIR IDAT5G26751.1
Annotated Gene Nameshaggy-related kinase 11
Annotated Gene Symbol(s)ATSK11, SK 11
Annotation TypeOrtholog
Chromosome Positionchr5:9399582-9401839 | Reverse length=405
E-Value6.5E-197
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2217732820438
Replicate 25.3561990857903
Replicate 35.68772736231
Condition 2: 8 Hour
Replicate 14.7472595305884
Replicate 22.8141245854553
Replicate 36.5444582508878
Condition 3: 24 Hour
Replicate 14.8414423405362
Replicate 23.7508943691458
Replicate 39.3804448658131


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39467.p1 GENE.R_Transcript_39467~~R_Transcript_39467.p1 ORF type:3prime_partial len:294 (+),score=39.08,Pkinase|PF00069.21|1.6e-56,Pkinase_Tyr|PF07714.13|2.1e-25 R_Transcript_39467:404-1282(+)
ATGGCTTCAGTGGGGATCGCTCCCACGTCTGGAATCAGAGAACCTGGTGGCAACACCGGTGCTATCGATAAGCTGCCCGATGAGATGAATGATATGAAAATAAGAGATGATAAGGAAATGGAAGCTGCTATAATCGACGGAAATGGGACCGAGACTGGTCATATCATTGTTACAACCATTGGTGGTAGAAATGGCCAACCTAAGCAGACAGTAAGCTATATGGCTGAGCGTATTGTTGGACAAGGGTCGTTTGGAGTTGTGTTTCAGGCAAGGTGCTTGGAGACGGGTGAAACTGTAGCCATAAAGAAAGTCCTTCAGGACAAGAGGTACAAGAACCGTGAGTTGCAAACGATGCGTCTCCTAGATCACCCAAATGTTATTTCCTTGAAGCACTGCTTCTTTTCTACAACTGGAAAGGATGAACTCTATCTTAATTTGGTGCTTGAGTTTGTCCCTGAAACTGTTCATCGTGTCATCCGACACTACAACAAGATCAACCAAAGGATGCCTTTGATATATGTAAAGCTCTACACATACCAGATTTGTCGAGCATTGGCCTACATTCACGGAACTATCGGAGTATGCCATAGGGATATAAAACCTCAAAACCTATTGGTTAATCCGCATACACATCAGTTGAAAATTTGTGACTTCGGAAGTGCTAAAATCCTGGTGAAAAGAGAGCCAAACATGTCGTATATATGCTCTAGGTATTACCGTGCTCCTGAACTTATATTTGGAGCAACAGAGTACACCACAGCAATCGATATTTGGTCTGCAGGATGTGTCCTTGCTGAGCTATTGCTTGGACAACCTTTGTTCCCCGGCGAGAGTGGAGTCGATCAGCTCGTGGAGATTATTAAGGTTTTGGGTACCCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39467.p1 GENE.R_Transcript_39467~~R_Transcript_39467.p1 ORF type:3prime_partial len:294 (+),score=39.08,Pkinase|PF00069.21|1.6e-56,Pkinase_Tyr|PF07714.13|2.1e-25 R_Transcript_39467:404-1282(+)
MASVGIAPTSGIREPGGNTGAIDKLPDEMNDMKIRDDKEMEAAIIDGNGTETGHIIVTTIGGRNGQPKQTVSYMAERIVGQGSFGVVFQARCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVISLKHCFFSTTGKDELYLNLVLEFVPETVHRVIRHYNKINQRMPLIYVKLYTYQICRALAYIHGTIGVCHRDIKPQNLLVNPHTHQLKICDFGSAKILVKREPNMSYICSRYYRAPELIFGATEYTTAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP

Click here to download the sequence:
Link to NCBI Protein BLAST