Transcript Information: R_Transcript_394672.p1


Annotated TAIR IDAT5G58420.1
Annotated Gene NameRibosomal protein S4 (RPS4A) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23619599-23620896 | Forward length=262
E-Value4E-88
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28669572180186
Replicate 20.21985654886176
Replicate 30.23986112666128
Condition 2: 8 Hour
Replicate 10.12819824579709
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.12019794360055
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_394672.p1 GENE.R_Transcript_394672~~R_Transcript_394672.p1 ORF type:5prime_partial len:191 (+),score=26.00,Ribosomal_S4e|PF00900.16|2.6e-34,40S_S4_C|PF16121.1|1.1e+03,40S_S4_C|PF16121.1|5e-24,KOW|PF00467.25|3.9e+03,KOW|PF00467.25|2.9e-06 R_Transcript_394672:2-574(+)
AAAGTTAGAACTGACACAACATATCCTGCTGGTTTCATGGACGTTATCAACATCGAAAAGACCAACGAAACCTTCAGACTTCTCTATGATACTAAGGGAAGATTCATCGTCCACAGAATTACTGCTGAAGAAGGAAAGTTCAAGTTGTGCAAAGTCAGAAGACAAGCCATTGGAGCAAAGAAAGTCCCATACATTGGCCTTCACGACGGAAGAACCATCAGATACCCAGATCCTCTCATCAAGGTGAACGATACCGTCAAAGTCAACATCGATACCGGAAAGATTGAAGACTTCATTAAGTTCGATATTGGAAACTTGGTAATGGTTACTGGAGGTCGTAACTTGGGAAGAGTCGGTGTTGTCACCAGAAAGGAAAAGCACCCTGGAAGCTTTGACATTGTCCACATCAAGGATGCTGTTGGTAACTCTTTTGCTACCCGTACCTCAAACGTCTTCGTCATCGGAAAGGGACCTAAGGCTTTCGTGTCACTTCCTAAGGGCAAGGGTGTCAAGAAGTCTATTTTGGAGGAAAGAGACGACAAGAGAAAGAAGGAGGCCGAAAAGACCGCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_394672.p1 GENE.R_Transcript_394672~~R_Transcript_394672.p1 ORF type:5prime_partial len:191 (+),score=26.00,Ribosomal_S4e|PF00900.16|2.6e-34,40S_S4_C|PF16121.1|1.1e+03,40S_S4_C|PF16121.1|5e-24,KOW|PF00467.25|3.9e+03,KOW|PF00467.25|2.9e-06 R_Transcript_394672:2-574(+)
KVRTDTTYPAGFMDVINIEKTNETFRLLYDTKGRFIVHRITAEEGKFKLCKVRRQAIGAKKVPYIGLHDGRTIRYPDPLIKVNDTVKVNIDTGKIEDFIKFDIGNLVMVTGGRNLGRVGVVTRKEKHPGSFDIVHIKDAVGNSFATRTSNVFVIGKGPKAFVSLPKGKGVKKSILEERDDKRKKEAEKTA*

Click here to download the sequence:
Link to NCBI Protein BLAST