Transcript Information: R_Transcript_394748.p2


Annotated TAIR IDAT2G15900.1
Annotated Gene NamePhox-associated domain;Phox-like;Sorting nexin, C-terminal
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:6927390-6932535 | Forward length=994
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.54539851419411
Condition 2: 8 Hour
Replicate 10
Replicate 20.26620097429983
Replicate 30.43218120524731
Condition 3: 24 Hour
Replicate 10
Replicate 20.26256260584021
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_394748.p2 GENE.R_Transcript_394748~~R_Transcript_394748.p2 ORF type:5prime_partial len:84 (+),score=6.75 R_Transcript_394748:2-253(+)
CTCATTGAAGAAGCTAAAATTCGGTTCCTTTGGTGGGCCATCTGTATATTCTCCATTACCTATTTCTTATCTCGGAGGAACCTCCAAAGTTCAAAACTTATTTTGTCATTTCTTCATTGTATGTATGCTGCATTACCCCACTATCTGCCTCAGGGTCTTATGCCCCATAGTTCACAAGTTAGGGGTTCATACTGGAGAATTATGGCCTTGTTTGGTAACGAGCTTGTAGTTGGTCGAAGAGTTAGTTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_394748.p2 GENE.R_Transcript_394748~~R_Transcript_394748.p2 ORF type:5prime_partial len:84 (+),score=6.75 R_Transcript_394748:2-253(+)
LIEEAKIRFLWWAICIFSITYFLSRRNLQSSKLILSFLHCMYAALPHYLPQGLMPHSSQVRGSYWRIMALFGNELVVGRRVSF*

Click here to download the sequence:
Link to NCBI Protein BLAST