Transcript Information: R_Transcript_394822.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value8E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.513088827099
Replicate 23.3472362982504
Replicate 31.9918902257524
Condition 2: 8 Hour
Replicate 12.3066394515521
Replicate 23.0786721375545
Replicate 31.3153341029266
Condition 3: 24 Hour
Replicate 11.8299701413387
Replicate 22.5571314655742
Replicate 31.7446721127237


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_394822.p1 GENE.R_Transcript_394822~~R_Transcript_394822.p1 ORF type:5prime_partial len:138 (+),score=30.12,zf-RVT|PF13966.2|7.8e-13 R_Transcript_394822:2-415(+)
TGGACTAAGATACCATGGAAGGCCTATGCTAGACCCAAAGATCAGGTAATAGCATGGATGGCTCTACAGAAGAAATTGACTAAAGAACTGCTCAAAAGGACAAATATTGTGGATGATGACACATGCCTTGTATGTAAGTCTGTACCAGAAACTTGCAAGCATTTGTTTTTTGAATGCAAGGATGCTGGGATGGGTTGGAGACAGTTACTGCATTGGCTGAATATTAAAAGGGGACCTTTAAGCTTCATCCATGAGATCAAGTGGTTCACAAAGAGAAGGGAGGGAAAGTCCATGCTACGCCAAGTTCAGAGAAGTGATTTTGTTACTGTTGTGGCTGAGTTGTGGCATGAGAGGAACATAAGAGTTTTTGAAGGCAGAAGCCGTGCTCCTCAGGAAATTGCAAGGCAAATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_394822.p1 GENE.R_Transcript_394822~~R_Transcript_394822.p1 ORF type:5prime_partial len:138 (+),score=30.12,zf-RVT|PF13966.2|7.8e-13 R_Transcript_394822:2-415(+)
WTKIPWKAYARPKDQVIAWMALQKKLTKELLKRTNIVDDDTCLVCKSVPETCKHLFFECKDAGMGWRQLLHWLNIKRGPLSFIHEIKWFTKRREGKSMLRQVQRSDFVTVVAELWHERNIRVFEGRSRAPQEIARQI*

Click here to download the sequence:
Link to NCBI Protein BLAST