Transcript Information: R_Transcript_39500.p1


Annotated TAIR IDAT2G27230.1
Annotated Gene Nametranscription factor-related
Annotated Gene Symbol(s)LHW
Annotation TypeOrtholog
Chromosome Positionchr2:11650895-11653840 | Forward length=650
E-Value1.8E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.421603751637
Replicate 218.947880863488
Replicate 327.579508901798
Condition 2: 8 Hour
Replicate 127.960577489648
Replicate 236.813646933659
Replicate 343.829498815081
Condition 3: 24 Hour
Replicate 137.669129375834
Replicate 226.970011703223
Replicate 337.684706628328


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39500.p1 GENE.R_Transcript_39500~~R_Transcript_39500.p1 ORF type:complete len:902 (+),score=178.00,bHLH-MYC_N|PF14215.2|2.4e-26,bHLH-MYC_N|PF14215.2|1e+04 R_Transcript_39500:640-3345(+)
ATGGGATATTTGTTGAAAGAAGCTCTCAAGTCTCTATGCGGTGTCAATCACTGGTCTTATGCCGTTTTCTGGAAAATCGGTTGCCAAAACCCCAAGCTGTTGATATGGGAAGAATGTTATCATGGAATTCTGCCATGCTCAGATGCTTCTTCCACCATGGAAGTTGGGGAGCGAGTTCGTTTGCTTGTGGATAAGATGATGATGACTAACCAAATTAATATGGTTGGAGAAGGGTTGGTTGGTAGGGCTGCATTTACAGGAAATCATCAATGGATTGCGTCCGGCAACTACAATGAAAATGCTCATCCTGCCGAGGTTCTTAATGAGATTCGCCTCCAATTTGCTGCTGGCATGCAAACAATTGCTGTCATTCCTGTCATTCCACATGGTGTTGTGCAGCTTGGTTCACACCTAGCTATCATGGATAATGTTGGATTTGTGCATGAGGTTAAGAGTTTAATTCTTCAAGTGGGATGTGTCCCTGGTGTGCTTATCTCGAACAACTATATTGCAAAAGATGCTTCTTCCATGTATGGGCTTCCAGCTGCTGATGTGACATCTGTCCCCCTCAATCTACATAGAAATCCACTGCACATGAACTCCAGTGCTGTTGGTGCTGACAGTCTCAACCTGCCGAGAAACTCATTTCAGACTCTAAGGCTCGCCAATCAATCATCCAATTCTCTGCTTACACAGTTTCAAGATAACCTGCAAGTTAGTGGTTCAACATTTATGGCGCCTAACCTGACCCAAGATCTAAGCAAGTCTCATGGAGATAATTATGCAGCAAAAATCAGTGCAAATGTGGATTCCAGTGTTTCTGCTCCCAGTGGCCTGGGAGAAACTAAAGTAAATAGAGTAAATAGTCTAGGATCTAGAATGAATTTTCCTCAGTCATCTGCAAACTGTAGGAGCTCCTTGTTATTAAAGCAGACCATTGTCCCACATGGAGGTTCACCAGAGGGGAATTGTATGATTTCTAGTGCATCAATGCCTCCGGTTGATAGAATTAAAGGACGTCACGCCACTTCAAAAGGAAGTGACACCAGCCTCATGCTTCAGAATGGCAAATTGGCTGTTGGCTTAGATGGTCGGCGTGGTCACTCTGTGCAAAGCTCTAATCATGACAAGATAGTATTTGATGACGTTGATTCTTCTATCAGGGAGTTGGTTGGCTTGATAAATACTGGAGATCAATTTAGTAGCAATAGCATCTTAGGTCTCCGCAATCATGAAAATTGTATTGGAGATAGTGAGCATCCGGCTAAGCATAATCCTGGTAGAGCAAATGATACTGATGTGCTTGAAGCTCAGAAATTGCACAAAATGCCAGATCATATGTCATCTGGAAATTTCATTCCTGGAAATTTTTGCAGTGGAAGTCAGGTACCATCATCAAAGGATCCTGTGTCGGAGGATGTGTTCTTCCAGCCTTCAGCAGGAGATGACTTGTATGATGTCCTGGGGGTGGATTTTAAAAATAAGCTTCTGAATGGTAATGATAGTAAACTTCACGACATGTTCGATACCGATATAAAAGATCAGATTAAGGATTTGCCAAGAACTATGAACCTGCAGAATTTGGGTTCTGAGTTCTATTCTGATTATCATGAGGCAATCTCAGAAAGTGGTGTCTTTTCTTCGTTTGGTTCTGATCACCTGTTGGATGCGGTGATATCTGGTGTTAGTTCTGCATCCAGGCAGATCTCGGATGACAACATGTCATGCAAGACAAATCTGTCAAAGATGAGTAGTTCCTCTGTGCCGAGTACTCCTCATAGCAATCCTCCAACATCTGGTCTGGTTAGTATACCTGATCAGATGCAAGCACAGCTATATGGCCTTTCTAAGCCCATGGTGAGATTAGTTGAACCGATTGGCTGTTCAATAAGGTCCACATGTGGTAAGAGTGATGGATCAAACTGTTCTCTGACCAGTTCCACGTATGGATCACAAATTAGCTCCTGGATTGAACAAGCGCCTAGTGCTAGTGTTTCGACTGCTAATTCGAAGAAAACTGATGAAGTAGGCAAAACCAATCGCAAAAGACTTAAACCTGGAGAAAACCCTAGACCAAGGCCTAAAGATCGGCAAATGATCCAAGATCGTGTGAAGGAGCTCCGCGAAATTGTGCCAAATGGGGCTAAGTGTAGCATCGATGCTTTGCTGGAACGTACAATCAAACATATGCTTTTCCTACAGAGTGTTACTAAGCATGCTGACAAACTGAAACAGACTGTGGAGTCTAAGATCATTAACAGGGAAGGTGGAATGCTTCTAAAGGACAATTTTGAGGGTGGTGCGACATGGGCCTTTGAGCTTGGTTCCCAATCTATGGTTTGTCCGATAGTGGTTGAGGACTTGAACCCACCGCGTCAAATGCTTATTGAGATGCTCTGCGAAGAACGGGGCTATTTCTTGGAGATAGCTGATATAATTAGAGGAATGGGGCTAACCATCTTAAAAGGAGTAATGGAAGCTCGGAATGATAAAATATGGGCACGTTTTGCAGTTGAGGCAAACAGGGATGTCACGAGGATGGAGGTATTTATTTCACTAGTCCATTTGTTGGAGCAAACTCTAAAGGGTGGCACAGCACCAGCCAATGGCATAAATGATGAGAATATGGCAGCTCATCCAGTGTCCATGCCTGCAACACAGCAACTAGTAGGTCCGATAGTATGTGGTGAGCCATTAGCTAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39500.p1 GENE.R_Transcript_39500~~R_Transcript_39500.p1 ORF type:complete len:902 (+),score=178.00,bHLH-MYC_N|PF14215.2|2.4e-26,bHLH-MYC_N|PF14215.2|1e+04 R_Transcript_39500:640-3345(+)
MGYLLKEALKSLCGVNHWSYAVFWKIGCQNPKLLIWEECYHGILPCSDASSTMEVGERVRLLVDKMMMTNQINMVGEGLVGRAAFTGNHQWIASGNYNENAHPAEVLNEIRLQFAAGMQTIAVIPVIPHGVVQLGSHLAIMDNVGFVHEVKSLILQVGCVPGVLISNNYIAKDASSMYGLPAADVTSVPLNLHRNPLHMNSSAVGADSLNLPRNSFQTLRLANQSSNSLLTQFQDNLQVSGSTFMAPNLTQDLSKSHGDNYAAKISANVDSSVSAPSGLGETKVNRVNSLGSRMNFPQSSANCRSSLLLKQTIVPHGGSPEGNCMISSASMPPVDRIKGRHATSKGSDTSLMLQNGKLAVGLDGRRGHSVQSSNHDKIVFDDVDSSIRELVGLINTGDQFSSNSILGLRNHENCIGDSEHPAKHNPGRANDTDVLEAQKLHKMPDHMSSGNFIPGNFCSGSQVPSSKDPVSEDVFFQPSAGDDLYDVLGVDFKNKLLNGNDSKLHDMFDTDIKDQIKDLPRTMNLQNLGSEFYSDYHEAISESGVFSSFGSDHLLDAVISGVSSASRQISDDNMSCKTNLSKMSSSSVPSTPHSNPPTSGLVSIPDQMQAQLYGLSKPMVRLVEPIGCSIRSTCGKSDGSNCSLTSSTYGSQISSWIEQAPSASVSTANSKKTDEVGKTNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTVESKIINREGGMLLKDNFEGGATWAFELGSQSMVCPIVVEDLNPPRQMLIEMLCEERGYFLEIADIIRGMGLTILKGVMEARNDKIWARFAVEANRDVTRMEVFISLVHLLEQTLKGGTAPANGINDENMAAHPVSMPATQQLVGPIVCGEPLAR*

Click here to download the sequence:
Link to NCBI Protein BLAST