Transcript Information: R_Transcript_395069.p1


Annotated TAIR IDAT3G23330.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:8347200-8349347 | Forward length=715
E-Value4.3E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30677245302048
Replicate 20.088219749648311
Replicate 30
Condition 2: 8 Hour
Replicate 10.20576357098525
Replicate 20.187906570094
Replicate 30.076267271514231
Condition 3: 24 Hour
Replicate 10.38584549962528
Replicate 20.27800746500728
Replicate 30.36786058297306


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_395069.p1 GENE.R_Transcript_395069~~R_Transcript_395069.p1 ORF type:5prime_partial len:238 (-),score=36.89,DYW_deaminase|PF14432.2|4.2e-32,PPR|PF01535.16|1.4e-07,PPR|PF01535.16|0.0051,PPR|PF01535.16|0.39,PPR|PF01535.16|1.6e+02,PPR_2|PF13041.2|4.8e-10,PPR_2|PF13041.2|0.0035,PPR_2|PF13041.2|18,PPR_2|PF13041.2|11,PPR_3|PF13812.2|0.0077,PPR_3|PF13812.2|0.0027,PPR_3|PF13812.2|0.24,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|0.086,PPR_1|PF12854.3|4.6e+02 R_Transcript_395069:195-908(-)
CACATACGGATTGCTAGGTGTATATTCAATAAAATAAAGCTTCACGACATAGTGTCATGGACAGCCATGATCATGGGATATGCTGTACATGGGCATGCTCATGATGCCCTTTCCTTATTTAAGCAAATGGAAATCGCGGGAGTAAAACCCAACTCTGTTGCTTTTGTAGCTGTTTTAACTGCTTGCAGTCATGCAGGTTTGGTAGATGAAGCCCAAAATTACTTTAACAGGATGACCCATGATTATCAGCTATCTCCACACTTGGAGCACTATGCTGCAGTAGCGGACCTTCTTGGCCGATCTGGAAGGTTGAAGGAAGCTTATGATTTTGTCCGTAAGATGACTGATCCGACAGGCAGTGTTTGGTCCACATTGCTTGCTGCTTGCCGAGTGCATAAAAATATTGAAATGCTGGAGCAGATGGAGAAAGAAGGCTATGTTCCTGACACAAGCGAGGTGCTTCATGATGTAGATGAGGAGTATAAGAAGACTTTGCTCTTTAGTCATAGTGAGAGACTGGCCATTGCATTTGGCATAATAAGTACTCCTGAGGGAATGACAGTATGTGTGACCAAGAACATACGGGTATGTATTGATTGCCATACTGCTATCAAGTTTATGTCCAAGATTGTTGGGAGGGAAATCGTTGTTAGGGATAATAGTAGGTTTCATCATTTCAAAGATGGCAAGTGTTCATGTGGAGATTATTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_395069.p1 GENE.R_Transcript_395069~~R_Transcript_395069.p1 ORF type:5prime_partial len:238 (-),score=36.89,DYW_deaminase|PF14432.2|4.2e-32,PPR|PF01535.16|1.4e-07,PPR|PF01535.16|0.0051,PPR|PF01535.16|0.39,PPR|PF01535.16|1.6e+02,PPR_2|PF13041.2|4.8e-10,PPR_2|PF13041.2|0.0035,PPR_2|PF13041.2|18,PPR_2|PF13041.2|11,PPR_3|PF13812.2|0.0077,PPR_3|PF13812.2|0.0027,PPR_3|PF13812.2|0.24,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|0.086,PPR_1|PF12854.3|4.6e+02 R_Transcript_395069:195-908(-)
HIRIARCIFNKIKLHDIVSWTAMIMGYAVHGHAHDALSLFKQMEIAGVKPNSVAFVAVLTACSHAGLVDEAQNYFNRMTHDYQLSPHLEHYAAVADLLGRSGRLKEAYDFVRKMTDPTGSVWSTLLAACRVHKNIEMLEQMEKEGYVPDTSEVLHDVDEEYKKTLLFSHSERLAIAFGIISTPEGMTVCVTKNIRVCIDCHTAIKFMSKIVGREIVVRDNSRFHHFKDGKCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST