Transcript Information: R_Transcript_39533.p1


Annotated TAIR IDAT3G06670.2
Annotated Gene Namebinding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2105908-2113136 | Reverse length=886
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.227939645719
Replicate 212.626476787933
Replicate 315.86252444016
Condition 2: 8 Hour
Replicate 114.892314216206
Replicate 220.29797588545
Replicate 323.547476647632
Condition 3: 24 Hour
Replicate 120.081544363185
Replicate 214.343454244328
Replicate 318.721715512369


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39533.p1 GENE.R_Transcript_39533~~R_Transcript_39533.p1 ORF type:complete len:878 (+),score=181.99,SMK-1|PF04802.11|3.5e-70,SMK-1|PF04802.11|1e+03 R_Transcript_39533:519-3152(+)
ATGGATAATCGTAGACAAAAGGAAAATCTCGATGCTGGCCAAACCAGGCGGGTCAAAGTCTATCGTCTAAGTGAGGATGGAAAGTGGGAGGATCAAGGGACTGGTCATGTTACTGTTGACTATTTGGAGAGATCAGAAGATCTTGGTCTGTTTGTTATTGATGAAGAGGATAATGAAACCTTACTATTGCATCGGATTAGTCCAGATGATATATATCGTAAACAAGAAGATACAATTATTTCCTGGAGAGATCCGGAGTATTCTACTGAATTGGCCCTTAGCTTTCAGGAGACTACTGGGTGCTCTTATATATGGGACCACATCTGCAATGTGCAAAGGAACTTACATTTTGGTACCCTTAACTATGATACATTTCACAGCGTGAATAGTGAGTTGCGGGAGCTGCCTGCTGTGGAGCTCTCAACACTTCCTTTGATATTGAAGATCGTGGTAGAAAGTGGCATTACAGATCAGATGCGAGTGACCGAACTTATTTTGCATGATCAAGAATTTTTTCGAAAGTTGATGAACCTGTTTAGGGTTTGCGAAGACCTTGAAAATCATGAAAGTCTTCACATGATCTACAAAATAGTCAAGGGGATCATAATGCTCAACAGTCCACAGATATTTGAGAAGATTTTTGGAGATGAATTGATGATGGATATCATTGGGTGTCTTGAGTATGATCCTGAGGTTTCTCATGTTCGACACCGCGATTTTTTGAAGGAGCATGTTGTTTTCAAGGAGGCTATACCAATCAAAGATCCCATGGTTTTGTCGAAAATTCACCAAACATACAGAATTGGCTATATGAAGGATGTGGTTTTACCCAGAGTACTGGATGATGCAACTGTTGCAAGTCTGAATTCTATAGTACATGCAAACAATGGTGTTGTAGTTTCTTTGTTGAAGGAAGACAGTACCTTTATTCAAGAATTATTTTCAAGGTTGAGATCGCCCAGCACATCATCGGAGTCAAAGAAGAATCTGGTATATTTCTTGCATGAGTTCTGTACTTTGAGCAAGAGTCTCCAGATGGTTCAACAACTTCGGCTCTTTAGGGATCTTGTAAATGAAGGTCTCTTCGACATCATCAGTGATATTTTGCAGAATGAAGACAAACGACTTGTTTTAACTGGGACAGATATCCTTATTCTTTTCTTAAATCAGGATCCAAACCTTTTGCGTGCATATGCTGTTCGACCTGAAGGAACTCCTCTTCTTGGTCTCCTGGTTCAAGGTATGCTCACAGATTTTGGGGATGACATGCATTGCCAGTTTCTTGAAATTCTTCGCACTTTATTAGATTCATACACATTATCCGGGTCGCAGAGAGATACTATCATTGAAGTTTTTTATGAGAGGCATTTGGGGCAGTTGATTGATGTCATAATATCTTCATGTTCGGGAGGAGGAAATAGTGTTCCTAAATCAGCAGCAGGAAGTTATATTAAATATAGCAGCACAAAGCCCGAGATCCTCTTGAATGTTTGTGAATTATTGTGCTTTTGTGTTGTGCACCATCCATACAGAATAAAGTGCAACTTTCTACACAACAATTTGATGGACAAGGTTTTACTTTTGACTCAGAGAAAAGAAAAGTACCTTGTTGTTGCTGCTGTGAGATTTATGCGCACTGTAATTTCTCGTAATGATGAAAATATCAATAATTATATTATAAAGCGCAACCTTCTCAAACCTATTGTGGATGCATTTGTTGCAAACGGGGATCGCTACAACTTGCTCAACTCTGCAGTTCTTGAGCTCTTTGAGTACATACGGAAGGAAAACCTGAAGCCATTACTCAAATATATAGTGGAGTCTTTCTGGAGCCAGCTTAGCAACTTCAAAAACTTCAATACCCTTGAGTCATTGAGGGGCAAATATGAGCAGTCCCTGGAGATTGTTGGAGTGAAATCTGCTGCCCATGTGGACTCAAGAAAACGGGTTGAAGAGCGCGCTTTGGAGAAAGAAGAAGAGGACTACTTCAACGAGGACAGTGATGAGGAAGATACAGCATCAGCTTCCATGGCACAACCGCAAAGGATACAGCCTCATCCAGCTTCATCCAATGGTTCTGCTCCTAGCAGCCCAAGATTAAGTTCAAGACCGGGTGGACTAGTGGATTATGATGACGATGAGGACGATGAAGACTACAAACCACCACCGAGAAGGCAGACTGATGCCTCAGATGCAGATGAAGATGCTTTAGAGTCTCTAAGCGCAAAAAGAAAGATGGCTTCGAAGGACGAGCCTGGGTTAGCTAAAAAGCAACGGCTTGATAAAAACTCTAAGCCAAAAGATAGTGTGTTTGCTGCCTTGTGCTCTACTCTTAGCCAGGCAGTTCTTCCCAACAAAAAAACAGCAAGTAATGCAAACAATGCTTCCCATCCCTCAAATGCGATTAGGAATACAGATAACGAGAATAATGAAGAGAAGGAAGCTGAAGTTGGTAGGAGTCAATATGATGAGAAAAGCAGTTCCGGTGAAGAAATTGGTAACGGAGAGAAGGTTGATTCTCAAAACAGCTCGGACATATGCTCTAAAGGTCAAGAAAATGGACAATTAGAAGGGGAAGAGCATCCACATATACCCACCAATTCTTCCTCAGAGATGGCAGTAAATGGGTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39533.p1 GENE.R_Transcript_39533~~R_Transcript_39533.p1 ORF type:complete len:878 (+),score=181.99,SMK-1|PF04802.11|3.5e-70,SMK-1|PF04802.11|1e+03 R_Transcript_39533:519-3152(+)
MDNRRQKENLDAGQTRRVKVYRLSEDGKWEDQGTGHVTVDYLERSEDLGLFVIDEEDNETLLLHRISPDDIYRKQEDTIISWRDPEYSTELALSFQETTGCSYIWDHICNVQRNLHFGTLNYDTFHSVNSELRELPAVELSTLPLILKIVVESGITDQMRVTELILHDQEFFRKLMNLFRVCEDLENHESLHMIYKIVKGIIMLNSPQIFEKIFGDELMMDIIGCLEYDPEVSHVRHRDFLKEHVVFKEAIPIKDPMVLSKIHQTYRIGYMKDVVLPRVLDDATVASLNSIVHANNGVVVSLLKEDSTFIQELFSRLRSPSTSSESKKNLVYFLHEFCTLSKSLQMVQQLRLFRDLVNEGLFDIISDILQNEDKRLVLTGTDILILFLNQDPNLLRAYAVRPEGTPLLGLLVQGMLTDFGDDMHCQFLEILRTLLDSYTLSGSQRDTIIEVFYERHLGQLIDVIISSCSGGGNSVPKSAAGSYIKYSSTKPEILLNVCELLCFCVVHHPYRIKCNFLHNNLMDKVLLLTQRKEKYLVVAAVRFMRTVISRNDENINNYIIKRNLLKPIVDAFVANGDRYNLLNSAVLELFEYIRKENLKPLLKYIVESFWSQLSNFKNFNTLESLRGKYEQSLEIVGVKSAAHVDSRKRVEERALEKEEEDYFNEDSDEEDTASASMAQPQRIQPHPASSNGSAPSSPRLSSRPGGLVDYDDDEDDEDYKPPPRRQTDASDADEDALESLSAKRKMASKDEPGLAKKQRLDKNSKPKDSVFAALCSTLSQAVLPNKKTASNANNASHPSNAIRNTDNENNEEKEAEVGRSQYDEKSSSGEEIGNGEKVDSQNSSDICSKGQENGQLEGEEHPHIPTNSSSEMAVNGS*

Click here to download the sequence:
Link to NCBI Protein BLAST