Transcript Information: R_Transcript_39556.p1


Annotated TAIR IDAT5G38830.1
Annotated Gene NameCysteinyl-tRNA synthetase, class Ia family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15545764-15548094 | Reverse length=511
E-Value6E-136
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.692557502022
Replicate 239.631053751008
Replicate 337.428391286965
Condition 2: 8 Hour
Replicate 145.767035913665
Replicate 249.111630056101
Replicate 345.397586480027
Condition 3: 24 Hour
Replicate 142.347529896501
Replicate 240.863117699106
Replicate 335.942386224087


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39556.p1 GENE.R_Transcript_39556~~R_Transcript_39556.p1 ORF type:complete len:489 (+),score=112.74,tRNA-synt_1e|PF01406.15|2.9e-114,tRNA-synt_1e|PF01406.15|4.4e+02,tRNA-synt_1e|PF01406.15|1.8e+03,tRNA-synt_1g|PF09334.7|0.68,tRNA-synt_1g|PF09334.7|8e-07 R_Transcript_39556:208-1467(+)
ATGGATGATCTACAGTGCCTGCTTCCTACCCACCAGCCACGTGTTTCTGATCACATGGATCAAATTAGGGATATGATAGCTAAGATAATTGAAAATGGCTGTGCATACCCTCTTGATGGGGATGTTTACTTTTCCGTTGAGAAGTTCCCAGATTATGGCAAGTTATCCAAACGAAAGCTTGAGGACAACAGAGCTGGTGAACGGGTTTCTGTGGATTCTAGAAAGCGACATCCTGCTGATTTTGCTTTATGGAAGTCTGCAAAACCTGGTGAGCCAAGTTGGGACAGTCCATGGGGTCCAGGAAGACCAGGATGGCACATAGAATGTAGTGCAATGAGTGCTCACTATCTGACATTCTCCTTTGACATTCACGGGGGTGGAATGGATTTAATCTTCCCTCATCATGAGAATGAGCTGGCACAAAGTTGTGCTACATGTGAAGAGACCCACATTAATTACTGGGTTCATAATGGATTTGTGACTGTTAATGAAGAAAAAATGTCAAAGTCAACGGGGAATTTCTTCACTATTCGTGAGGTTACCAAACAATACCATCCCTTGGCTTTGAGGTATTTCTTGCTAAGCATGCACTACAATTCTCCAGTCAACTATTCACTGTCACAAATAGATATTGCATCAGATGCAGTCTTCCGTATTTATCAGACACTGGAAGATTGTAGAGATGCTCTGTTGCCATTTCAAGAGGGAAACTTGGATGAAAAGACCAATACGAACAGCACAAAACCTAATAAACCTTCGAAAAAGGACGAAGACCCTGTGAAGAAACTGAAGGAAAATTTTGAGAGTAAAATGGCTGATGACTTGCGTACTCCTGAGATACTGAAGGGTTCTCTGGAAGATTCATTGACACTCATAAACAAGCAATTGACTGAATTAAAGAAGTTGCAAAAGCTAAAGCAGAAACAGCGGAAGCGACAGCAACAACTTTTGTCAATTGTTCAGTTGCTTAATGAATTGGAGAAGGAAATCAGGAAGGTTTTGGATGTCCTTGGGCTGCTTTCGGCTCGCCCTTATTCTGAGGTTCTTCAGCAGTTGAAAGTGAAGGCATTAACTAGAGCTGAGATGACTGAAGATGAAATTAATGTTCTGATTGAAGAAAGAGTAGCAGCTAGGAAGAACAAAGATTTTGCAAAGAGTGATCAAATTCGAAGCGAGTTAACAGCCAAAGGCATCAGCCTTATGGATCAAGCGACAGGTCAAACAACGTGGAGACCTTGTGTGCCAGAGAGAAAAGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39556.p1 GENE.R_Transcript_39556~~R_Transcript_39556.p1 ORF type:complete len:489 (+),score=112.74,tRNA-synt_1e|PF01406.15|2.9e-114,tRNA-synt_1e|PF01406.15|4.4e+02,tRNA-synt_1e|PF01406.15|1.8e+03,tRNA-synt_1g|PF09334.7|0.68,tRNA-synt_1g|PF09334.7|8e-07 R_Transcript_39556:208-1467(+)
MDDLQCLLPTHQPRVSDHMDQIRDMIAKIIENGCAYPLDGDVYFSVEKFPDYGKLSKRKLEDNRAGERVSVDSRKRHPADFALWKSAKPGEPSWDSPWGPGRPGWHIECSAMSAHYLTFSFDIHGGGMDLIFPHHENELAQSCATCEETHINYWVHNGFVTVNEEKMSKSTGNFFTIREVTKQYHPLALRYFLLSMHYNSPVNYSLSQIDIASDAVFRIYQTLEDCRDALLPFQEGNLDEKTNTNSTKPNKPSKKDEDPVKKLKENFESKMADDLRTPEILKGSLEDSLTLINKQLTELKKLQKLKQKQRKRQQQLLSIVQLLNELEKEIRKVLDVLGLLSARPYSEVLQQLKVKALTRAEMTEDEINVLIEERVAARKNKDFAKSDQIRSELTAKGISLMDQATGQTTWRPCVPERKD*

Click here to download the sequence:
Link to NCBI Protein BLAST