Transcript Information: R_Transcript_39569.p1


Annotated TAIR IDAT3G55410.1
Annotated Gene Name2-oxoglutarate dehydrogenase, E1 component
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20541897-20545728 | Forward length=1017
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 183.383251466355
Replicate 262.453176213738
Replicate 375.464100206363
Condition 2: 8 Hour
Replicate 161.683233875936
Replicate 270.527845179166
Replicate 391.844655896678
Condition 3: 24 Hour
Replicate 185.297603693904
Replicate 281.251660328977
Replicate 383.577094147907


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39569.p1 GENE.R_Transcript_39569~~R_Transcript_39569.p1 ORF type:complete len:1019 (+),score=229.00,Transket_pyr|PF02779.20|8.5e-67,E1_dh|PF00676.16|3.5e-65,OxoGdeHyase_C|PF16870.1|5.2e-51,2-oxogl_dehyd_N|PF16078.1|1.2e-16,2-oxogl_dehyd_N|PF16078.1|4.9e+03 R_Transcript_39569:30-3086(+)
ATGGCTTGGTTTAAAGCCGGTTCTGCTGTGGCAAAGCTTGCTGTTAGGAGAACTCTGTCTCAGGGGCGTTCGTACGTGACAAGGACGCGTGTTATTGAATCACAGAAGCGGTGTTTCCATAGCACGGTTTTTAGGCCTCAAGCTGCTCCTGTTCCCCGCCCTGTACCCCTGTCTAGGCTAACCGATAGTTTCTTAGATGGGACGAGCAGTGTATACCTAGAGGAGCTGCAAAGAGCTTGGGAAGCTGACCCAAATAGTGTTGATGAGTCATGGGACAATTTCTTCAGGAACTTTGTTGGCCAAGCGGCTACATCGCCTGGGATTTCTGGGCAGACTATTCAAGAGAGTATGCGTCTCCTTCTGCTTGTGAGAGCTTACCAAGTTAATGGTCACTTCAAGGCCAAGTTGGACCCATTGGGTCTGGAGGGGAGGCCTTTTCCTGAAGATTTGGACCCAGAGCTGTATGGGTTCTCTGAAGCTGACCTTGATCGGGAGTTCTTTCTTGGAGTATGGAAGATGGCTGGATTTTTGTCAGAGAACCGTCCAGTACAAACTCTGAGGAATATACTTGCCCGTCTTGAGCAGGCTTATTGTGGGAGCATTGGTTTTGAGTACATGCACATTGCTGACCGTGAGAAGTGTAACTGGTTGCGAGACAGGATTGAGACCCCTACTCCAATGGAATATAACAGGGAACGACGTAAAGTGATGCTGGACAGACTTATGTGGAGCACACAGTTTGAGAGTTTCTTGGCAACTAAGTGGACCACAGCTAAAAGGTTTGGTCTTGAAGGTTGTGAAACCTTGATTCCTGGTATGAAGGAGATGTTTGACAGGTCAGCAGATCTTGGGGTTGAGAGTATTGTTATTGGAATGTCTCACAGGGGTAGGTTAAATGTGTTGGGCAATGTTGTGCGAAAACCACTTCGACAAATATTCAGTGAGTTTAGTGGTGGCACGAAACCTTCAGATGAAGTTGGACTGTACACAGGAACTGGGGATGTCAAGTACCATTTAGGTACTTCTTATGACAGGCCTACTAGAGGTGGGAAGCGAATTCATCTCTCCTTGGTTGCAAATCCAAGTCATTTGGAAGCTGTTGACCCAGTTGTTGTTGGGAAAACAAGAGCTAAGCAGTATTATTCTAACGATGCAGACAGGACTAAAAATATGGCTATTTTGATTCATGGTGATGGTAGTTTTGCTGGACAGGGTGTCGTTTATGAGACACTCCATTTGAGTGCTCTTCCAAATTATACTACAGGTGGTACCATACATATTGTAGTGAACAATCAAGTGGCTTTCACAACTGATCCTAGGTCAGGAAGATCTTCACAGTACTGTACTGATGTTGCCAAAGCTCTAAATGCCCCCATTTTTCATGTGAATGGAGATGATCTAGAAGCTGTGGTTCATGTTTGTGAGCTTGCTGCAGAATGGCGTCAGACATTCCATTCAGATGTTGTGGTTGATATTGTCTGCTACCGTAGGTTTGGGCACAATGAGATTGATGAGCCATCATTCACACAACCAAAAATGTACAAGGTCATTCGCAATCATCTTTCAGCTCTTGAACTTTACAAAAAGAAAGTTCTTGAATCTGGAGAAATGTCAAAACAAGATATTGATGAAATCCAGAAGAAGGTGACTACAATCCTCAATGAGGAGTTTGAAGCAAGCAAGGAGTATGTGCCTCAAAGAAGGGACTGGCTTTCTGCTTACTGGCAAGGGTTTAAATCTCCAGAGCAGCTTTCTAGAATCCGTAACACTGGGGTCAAACCAGAGATCTTGAAGAATGTTGGCAGGGCAATCACCAAGCTTCCTGAAAATTTCAATCCACACAAAGCAGTTAAAAGGATTTATGAGCAACGTGCCCAGATGATTGAAACAGGGGAGGGAATTGATTGGGCAGTGGGAGAAGCACTTGCCTTTGCTACTTTGCTGGTGGAAGGAAATCATGTCCGATTGAGTGGTCAGGATGTGGAAAGAGGAACATTCAGTCATAGGCATTCTGTGCTCCATGATCAGGAAACTGGGGGGATATACTGTCCTTTAGATCATATCATGATCAACCAAGATGAGGAGATGTTTACTGTCAGTAACAGTTCTCTTTCAGAGTTTGGTGTTCTTGGATTTGAATTGGGATATTCAATGGAAAACCCAAATTCATTGGTGCTCTGGGAGGCTCAGTTTGGTGACTTTTCTAATGGGGCACAAGTAATCTTTGATCAGTTCTTGAGCAGTGGGGAGGCAAAGTGGTTACGTCAAACTGGTCTTGTTGTGCTACTTCCTCATGGATATGATGGTCAGGGACCTGAACATTCAAGTGCACGGCTGGAACGCTTCCTTCAGATGAGTGACGACAATCCCTATGTCATACCAGATATGGAGCCCACAATGAGGAAGCAGATCCAGGAATGCAACTGGCAGGTTGTGAATGTGACAACTCCTGCGAATTATTTCCATGTGTTGCGTCGCCAGTTACACAGGGAATTCCGCAAGCCTCTCATTGTGATGTCCCCCAAGAATTTGCTTCGTCACAAAGAATGCAAATCAAATCTATCGGAGTTTGATGATGTGCAAGGCCACCCAGGTTTTGATAAGCAAGGAACCAGATTTAAGCGTCTCATAAAGGACCAGAATATGCACTCAGATCGTGAGGAGGGTATAAGGCGTCTCGTCCTGTGCTCAGGAAAAGTTTACTATGAACTTGATGAAGAAAGGAAAAAGACAAGTAGCTCAGATGTTGCCATTTGTAGGGTGGAGCAGCTATGTCCTTTCCCCTATGACCTTGTGCAGCGAGAGTTGAAACGTTATCCAAATGCTGAAGTGGTGTGGTGTCAGGAAGAGCCAATGAACATGGGTGCTTACAGCTACATTGCACCCCGCTTGGCTACGGCCATGAAATCTGTAGAAAGAGGAAATGTAGACGACATTAGATATGTTGGTCGCCCTCCATCTGCAGCAACAGCCACTGGTTTCCTGCAGGTCCACTTTAGAGAACAGACAGCTCTTGTGCAGAAGGCATTGCAGCGGGAACCAATCCCATTTCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39569.p1 GENE.R_Transcript_39569~~R_Transcript_39569.p1 ORF type:complete len:1019 (+),score=229.00,Transket_pyr|PF02779.20|8.5e-67,E1_dh|PF00676.16|3.5e-65,OxoGdeHyase_C|PF16870.1|5.2e-51,2-oxogl_dehyd_N|PF16078.1|1.2e-16,2-oxogl_dehyd_N|PF16078.1|4.9e+03 R_Transcript_39569:30-3086(+)
MAWFKAGSAVAKLAVRRTLSQGRSYVTRTRVIESQKRCFHSTVFRPQAAPVPRPVPLSRLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQAATSPGISGQTIQESMRLLLLVRAYQVNGHFKAKLDPLGLEGRPFPEDLDPELYGFSEADLDREFFLGVWKMAGFLSENRPVQTLRNILARLEQAYCGSIGFEYMHIADREKCNWLRDRIETPTPMEYNRERRKVMLDRLMWSTQFESFLATKWTTAKRFGLEGCETLIPGMKEMFDRSADLGVESIVIGMSHRGRLNVLGNVVRKPLRQIFSEFSGGTKPSDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVVGKTRAKQYYSNDADRTKNMAILIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPRSGRSSQYCTDVAKALNAPIFHVNGDDLEAVVHVCELAAEWRQTFHSDVVVDIVCYRRFGHNEIDEPSFTQPKMYKVIRNHLSALELYKKKVLESGEMSKQDIDEIQKKVTTILNEEFEASKEYVPQRRDWLSAYWQGFKSPEQLSRIRNTGVKPEILKNVGRAITKLPENFNPHKAVKRIYEQRAQMIETGEGIDWAVGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVLHDQETGGIYCPLDHIMINQDEEMFTVSNSSLSEFGVLGFELGYSMENPNSLVLWEAQFGDFSNGAQVIFDQFLSSGEAKWLRQTGLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPYVIPDMEPTMRKQIQECNWQVVNVTTPANYFHVLRRQLHREFRKPLIVMSPKNLLRHKECKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNMHSDREEGIRRLVLCSGKVYYELDEERKKTSSSDVAICRVEQLCPFPYDLVQRELKRYPNAEVVWCQEEPMNMGAYSYIAPRLATAMKSVERGNVDDIRYVGRPPSAATATGFLQVHFREQTALVQKALQREPIPFP*

Click here to download the sequence:
Link to NCBI Protein BLAST