Transcript Information: R_Transcript_39573.p1


Annotated TAIR IDAT2G30320.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:12925728-12927896 | Reverse length=510
E-Value1.4E-174
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.4318274078286
Replicate 25.5027478786209
Replicate 37.6213866723258
Condition 2: 8 Hour
Replicate 17.3275543801236
Replicate 27.4813359319952
Replicate 39.0420662569957
Condition 3: 24 Hour
Replicate 19.0465708778314
Replicate 28.4859453352221
Replicate 38.0553262602336


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39573.p1 GENE.R_Transcript_39573~~R_Transcript_39573.p1 ORF type:complete len:538 (+),score=91.88,PseudoU_synth_1|PF01416.16|2.3e-15,PseudoU_synth_1|PF01416.16|5.4e+02,PseudoU_synth_1|PF01416.16|0.00017 R_Transcript_39573:144-1757(+)
ATGGCGGGGTCGTCTCTCCGGCTTCCGATGAGGAAGGGTATTGGTATTGGTATTGGGAGTGGATGTTGGTCTTCTCCACTCTCCGTCTCCTGTAGTCGCCCTTCTCCCTGCAATTGGACCCACCGCATTGGCTTCAGTATACTGGCAACCCAGTTTTCGGTGTCCCCTGCAAATTTTGACGAAACCCTCGCTACGATTCAAGTCCCTGCTAGTGCCCCCCCTTTCTCTGAGTCTCAGCCTGGGACCTCTAATAATACTAAGTGGGAAGGCTTCCTCAAGAAGAAAGTGGTCATGCGTGTCGGCTATGTTGGTACCAACTACAAAGGCCTGCAGAAGCAGCGCGAAGACAACATTCGCACTATCGAAGAAGCCTTGGAAACTGCCCTCTACAAGGCTGGTGGCATTCGCGACAGTAATTTTGGAAATTTGCACAAAATCGCCTGGGCTAGAAGTAGCCGCACTGACAAAGGAGTACATTCACTAGCAACTACAATATCTTTGAAGTTGGAAATTCCTGACTATGCATGGAGGGATGATCCTAATGGTATCGTCCTTGCAAACCATGTCAACTCTCACCTCCCTGATGATATCAGGGTTTTCAGTATTTTACCCTCTAAGAGGAGCTTTGATCCTCGGAGAGAATGTCATATTAGAAATTATTCTTATCTCCTTCCTGCCGACATTATTGGAATAACAACCAACTCTAGCACTGCTGAAATTGATGATCACATAACGGACTTCAATGCCATTCTCAACACTTTTGAGGGAGAACATCCTTTTCATAACTATACGGCAAGATCAAAATACAGAAGACGGTCATCTAAAGGCCGTGCTGATAGAAGGCACAAATTATTGAATAAGGTTCTATCTGTTGAGGACTATGAAAAGTCTATTAATGATCCATTGACTGATGGAGCATTGATCAGAAATTCCCTATATGATAGTGATTCTAACGAACTGGTTGTTTCGGAAGATGGGCATAGGGATGAGTCAAGCAGTGATAAGCCTGCTACAGCTATACATGCGAGATGGCTTCATGAACGTGATGATGAGGATAGGCTTAGTTCTGCTCACTGGAGGAGGATATTTCAGTGTTCCTGTGGCAAACTGGATACGTCACTTAACAATGCTTTTGTGGAGCTCTCAATATGCGGCGAGTCTTTCATGCTACACCAGATCCGCAAAATGGTTGGTACTGCTGTGGCAGTTAAGCGTGGTTTGCTTCCCAGAGATATTCTTAAATTGTCACTCAACAAGTTCTCGAGAATCGTCCTGCCCCTTGCTCCGTCTGAAGTTTTGTTGTTGAGAGGGAATGACTTTAAATTGAGAAAAATTGCTGGCTTCACAAGAAGGCCTGAGATGCACATTTTGGTTGATTCAGAAGAAATTCAAAAAGAAGTTGATAGGTTTTATAAGAGTTTACTGCTGCCTCAGGTTTCTATGTTTTTGGACACTTCTGAGTCTCCCTGGAAGGAATGGCTTGTGAATTTGGATGACAATGCTGGCATACCAGAATCTGAGTTGAATGAAGTCAGAACTGCTTGGAATCTGTGGAATGATGAATTCCAAAACCGAGTCCTTGTTCGAAAGAAACCTGGAACATCAGATGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39573.p1 GENE.R_Transcript_39573~~R_Transcript_39573.p1 ORF type:complete len:538 (+),score=91.88,PseudoU_synth_1|PF01416.16|2.3e-15,PseudoU_synth_1|PF01416.16|5.4e+02,PseudoU_synth_1|PF01416.16|0.00017 R_Transcript_39573:144-1757(+)
MAGSSLRLPMRKGIGIGIGSGCWSSPLSVSCSRPSPCNWTHRIGFSILATQFSVSPANFDETLATIQVPASAPPFSESQPGTSNNTKWEGFLKKKVVMRVGYVGTNYKGLQKQREDNIRTIEEALETALYKAGGIRDSNFGNLHKIAWARSSRTDKGVHSLATTISLKLEIPDYAWRDDPNGIVLANHVNSHLPDDIRVFSILPSKRSFDPRRECHIRNYSYLLPADIIGITTNSSTAEIDDHITDFNAILNTFEGEHPFHNYTARSKYRRRSSKGRADRRHKLLNKVLSVEDYEKSINDPLTDGALIRNSLYDSDSNELVVSEDGHRDESSSDKPATAIHARWLHERDDEDRLSSAHWRRIFQCSCGKLDTSLNNAFVELSICGESFMLHQIRKMVGTAVAVKRGLLPRDILKLSLNKFSRIVLPLAPSEVLLLRGNDFKLRKIAGFTRRPEMHILVDSEEIQKEVDRFYKSLLLPQVSMFLDTSESPWKEWLVNLDDNAGIPESELNEVRTAWNLWNDEFQNRVLVRKKPGTSDD*

Click here to download the sequence:
Link to NCBI Protein BLAST