Transcript Information: R_Transcript_395893.p1


Annotated TAIR IDAT4G09660.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 839 Blast hits to 796 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 438; Fungi - 0; Plants - 401; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:6104446-6106607 | Forward length=664
E-Value8E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 21.199788595217
Replicate 30.21815940567764
Condition 2: 8 Hour
Replicate 10
Replicate 20.21296077943986
Replicate 30.51861744629677
Condition 3: 24 Hour
Replicate 10.21864578312099
Replicate 20.21005008467216
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_395893.p1 GENE.R_Transcript_395893~~R_Transcript_395893.p1 ORF type:internal len:105 (+),score=20.80 R_Transcript_395893:3-314(+)
TTTCATCATTATCGGGTTGAAGTATTCTTAGAAGTCATTGATCTACTACCTCAAGAGCTTAACAATCACTTTGATGAGGTAAGTATGGAGTTGTTTACTTGCATGGCTTGCTTTTGCTCTCTTGACTTATTCTCTAATTTTGAGAAGCAAAAGTTGTTGAGACTTGTGTTTTATGCTAATGAATTTTCAAATGTTGAGATGATTAGTCTTGATTACCAGTTTGATAATTTCATTAGTGATATGAGGATGGATGAGAGATTTCAAAACTTGCAAGATATTACTCAGCTTTCAAAGAAACTTGTTGAAACTGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_395893.p1 GENE.R_Transcript_395893~~R_Transcript_395893.p1 ORF type:internal len:105 (+),score=20.80 R_Transcript_395893:3-314(+)
FHHYRVEVFLEVIDLLPQELNNHFDEVSMELFTCMACFCSLDLFSNFEKQKLLRLVFYANEFSNVEMISLDYQFDNFISDMRMDERFQNLQDITQLSKKLVETG

Click here to download the sequence:
Link to NCBI Protein BLAST