Transcript Information: R_Transcript_3959.p1


Annotated TAIR IDAT2G46370.4
Annotated Gene NameAuxin-responsive GH3 family protein
Annotated Gene Symbol(s)JAR1
Annotation TypeOrtholog
Chromosome Positionchr2:19034233-19036369 | Forward length=586
E-Value8.3E-267
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 169.707428473624
Replicate 251.621938609726
Replicate 362.243135261269
Condition 2: 8 Hour
Replicate 147.916304681247
Replicate 266.427240366143
Replicate 376.048989323345
Condition 3: 24 Hour
Replicate 164.994343910155
Replicate 252.476305636201
Replicate 361.134623435817


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3959.p1 GENE.R_Transcript_3959~~R_Transcript_3959.p1 ORF type:complete len:580 (+),score=96.35,GH3|PF03321.9|2.6e-186 R_Transcript_3959:99-1838(+)
ATGTTGGAGAAAATGGAGGGATTATTGAACACTGAGAAAGTGATCCAAGAATTTGAGGAGATGACCAAAAATGCTGAGAAGGTACAAAGAGAGACCTTGAAGAAGATACTAGAGGATAACTCAGAAGCAGAGTATTTGTTAGGCACAGGACTCAATAGAAGAACTGATCCTGAAAGCTATAAGCAATGTGTCCCTCTTGTTTCTCACACCGATTTGGAACCTTACATTCAAAGAATCATTGATGGGGATACTTCCCCTATCCTTACTGCCACACCCATCTCCACATTTTCATTGAGCTCTGGAACAACTCAAGGGAAGCCGAAATTCGTGCCGTTCAATGAAGAACTTTTCCAGACAACTATGCAAATCTATGAGACTGCTTATTCATATAGGACCAGGGAATTTCCTCTACAAACTGGGAAGGGATTGCTTATTGTTTACAGTAGCAAGCAGTTCAAAACCAAAGGGGGTTTGTCTGCAGGAACTGCAACTACGAATGTATTTAGACACCCCCAGTTTTGGCAAAGAACCAAGGCTATAAAATTCCAAGGCTGCAGTCCATCTGAAGTTGTGTTTGGATCTGATTACCATCAATCCTTATACTGTCATCTTCTATGTGGGCTGTTACAACATGATGAAATCGAGTTTGTCTTCTCCACATTTGCTCATAGCATTGTTCAGGCCTTTCAGACCTTTGAGCATATTTGGGAAGAGCTTTGCATCGACATTCGAGATGGGGTCTTGAATGAAAGGATCACTGACCAGGCTATCCGAGATGCTATGTCTAAAATTCTCAAGCCTAATCCTGAACTGGCTGACATGATCCACAAGAAATGTTCTGGTTTAAGTAAATGGTATGGCTTGATACCAGAGCTTTTCCCAAATGCCAAGTATGTGTATGGCATCATGACTGGCTCTATGGAGCCTTACATGAGCCAATTAAGGCGCTATGCTGGGTGGATACCTTTGGTATGTGCTGATTATGGAGCATCAGAGGGATGGATCGCAGCAAATGTTAACCCAAAATCGCCCCCTGAATCTGCCACCTTTACTGTGATTCCGAATATTGGCTATTTTGAATTTATCCCTTTGAACGAGGCCAGGGTTGGAGGTATGGAGCCTAAGCCAGTAGGTTTGACCGAAGTTAAGGTTGGCCAAGAGTATGAGATCATTGTCACAAACTTAGCAGGGTTGTATCGGTATCGGCTAGGAGATGTTGTCAAGGTAATGGGCTTCCACAATGCAACTCCAAAGCTGAAATTTGTGTGCCGTCAGAGCCTTCTCCTGTCTGTGAACATCGACAAGAACACCGAGAAGGATCTACAGCTGACGATGGAGGAGGCCAGCAAGCTGCTGGTAGCTGAAAAGGTTGATGTGATCGATTTCACAAGTCATGTGAATGTGAGCAAGGACCCCGGTCACTATGTGATCTTCTGGGAGTTAAGTGGAGATGCTGATGAGAATGTGTTACAGGAATGCTCTAACAGCTTGGACCGCGCCTTTCTTGATGCGGGCTATGTGAGCTCGCGTAAGGTTGGAACCATCGGACCCCTTGAGCTTCGAGTCCTGAGGAGGGGAACCTTCCATATGATATTACTGCACTACTTGTCTTTGGGGGCTGCAGTTAGCCAGTTTAAGACACCCCGCTGTGTCCTGCCCTCCAATAAGTCTGTCTTGCAAATCTTGAATAGTAATGTTCTTAAGAGTTTTGTTAGCACTGCATTTGATAGTAAATTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3959.p1 GENE.R_Transcript_3959~~R_Transcript_3959.p1 ORF type:complete len:580 (+),score=96.35,GH3|PF03321.9|2.6e-186 R_Transcript_3959:99-1838(+)
MLEKMEGLLNTEKVIQEFEEMTKNAEKVQRETLKKILEDNSEAEYLLGTGLNRRTDPESYKQCVPLVSHTDLEPYIQRIIDGDTSPILTATPISTFSLSSGTTQGKPKFVPFNEELFQTTMQIYETAYSYRTREFPLQTGKGLLIVYSSKQFKTKGGLSAGTATTNVFRHPQFWQRTKAIKFQGCSPSEVVFGSDYHQSLYCHLLCGLLQHDEIEFVFSTFAHSIVQAFQTFEHIWEELCIDIRDGVLNERITDQAIRDAMSKILKPNPELADMIHKKCSGLSKWYGLIPELFPNAKYVYGIMTGSMEPYMSQLRRYAGWIPLVCADYGASEGWIAANVNPKSPPESATFTVIPNIGYFEFIPLNEARVGGMEPKPVGLTEVKVGQEYEIIVTNLAGLYRYRLGDVVKVMGFHNATPKLKFVCRQSLLLSVNIDKNTEKDLQLTMEEASKLLVAEKVDVIDFTSHVNVSKDPGHYVIFWELSGDADENVLQECSNSLDRAFLDAGYVSSRKVGTIGPLELRVLRRGTFHMILLHYLSLGAAVSQFKTPRCVLPSNKSVLQILNSNVLKSFVSTAFDSKL*

Click here to download the sequence:
Link to NCBI Protein BLAST