Transcript Information: R_Transcript_396054.p1


Annotated TAIR IDAT4G34640.1
Annotated Gene Namesqualene synthase 1
Annotated Gene Symbol(s)SQS1, ERG9
Annotation TypeOrtholog
Chromosome Positionchr4:16538489-16541655 | Forward length=410
E-Value3.7E-136
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13898193620344
Replicate 20.21316041031775
Replicate 30.29069463954508
Condition 2: 8 Hour
Replicate 10.99434984557341
Replicate 20.39727455047792
Replicate 30.55284093260062
Condition 3: 24 Hour
Replicate 10.46614837010567
Replicate 20.27988907221545
Replicate 30.11110509993349


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_396054.p1 GENE.R_Transcript_396054~~R_Transcript_396054.p1 ORF type:3prime_partial len:394 (+),score=62.66,SQS_PSY|PF00494.15|2.4e-34 R_Transcript_396054:97-1275(+)
ATGAAGACAACAAGCAGCAGCAGCAGGTTCGTATTAGCTGGGGTAATCCCGCTAGATCAAAGCACTAACAAGAGGAATCGCCTGATAATGATGAGAGAAAACAGATTCACAAAAGGAGCTACAACTGGATGTAGTGGATCGCGGCCGCTAGCCACACGTAGTAGTAGTCAGTTGATAAACAAGAAGGTTACGATGGTAAAAGCTACAGAAACTGATCATGAGGATCAAACCACCACTTCTACTCCAACAACCTCCTGGTCTCCCAGAAATGTTAATAAAAGGGTTGAGATGATAGAAAGAGAGAGCCCCCAGGACGAAAGAAATACTATCAGAAATCGTATCAAGGGAACCCAGAGTTTTGAAGAAAGAGAAGGCCAAGAAGAAAGTGGGGGCTTGGGAGCAATTCTGAAGTACCCAGATGAAGTGTATCCGATGTTGAAGATAGCCATGGCAATGAAAAGGGCCCAGAACCAAATCCCTCAAGAGGCCCATTGGGCTTTCTGTTATTCCATGCTCAACAAAGTCTCTAAAAGCTTTGCCCTTCTCATTCAACAGCTCGACAATGAATACCGCAATGCTGTATGTATCTTTTATTTAGTTCTTCGAGCCCTTGATACCATAGAGGATGATATGAGCATTGCCGCAGATGTCAAAATTCCTGTTCTGCAAACGTTTCATCAGCATATATATGATCGCGACTGGCATTTTTCATGTGGTACAGAGGATCACAAAGAACTAATGGATGGATTCCATCATGTCTCAGCAGCTCTAATGGAGCTTGGAAAAAGTCACCAGGAGGCCATTGAGGATACCACGAAAAGAGTCGGTGCAGGAATGGCAAAATTCCTCTGCAAGGAGGTAGAAACAATTGATGACTATGATGAATATTGTCACTATGCGTCAGTACTTCCTGCAATAGGTTTGTCAAAGATTTTTGGTGTTGAGGATCTGGTACCAGATTCTCTCGCCAGTTCTATTGGTTCATTCTTTCAGAAAACGACTGTCATTCGTGATTACCTAGAAGACATAAACGAGACACCAAAATCTCGCATGTATTGGCCTAGGGAGATATGGAGTAAATATGTGAACAGACTTGAGGATTTGAAATATGAGGAGAACTCAGAGAAGGCAGTACAGTGTTTAAATGAAATGGTCACAAACGCTTTATCACATGTGGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_396054.p1 GENE.R_Transcript_396054~~R_Transcript_396054.p1 ORF type:3prime_partial len:394 (+),score=62.66,SQS_PSY|PF00494.15|2.4e-34 R_Transcript_396054:97-1275(+)
MKTTSSSSRFVLAGVIPLDQSTNKRNRLIMMRENRFTKGATTGCSGSRPLATRSSSQLINKKVTMVKATETDHEDQTTTSTPTTSWSPRNVNKRVEMIERESPQDERNTIRNRIKGTQSFEEREGQEESGGLGAILKYPDEVYPMLKIAMAMKRAQNQIPQEAHWAFCYSMLNKVSKSFALLIQQLDNEYRNAVCIFYLVLRALDTIEDDMSIAADVKIPVLQTFHQHIYDRDWHFSCGTEDHKELMDGFHHVSAALMELGKSHQEAIEDTTKRVGAGMAKFLCKEVETIDDYDEYCHYASVLPAIGLSKIFGVEDLVPDSLASSIGSFFQKTTVIRDYLEDINETPKSRMYWPREIWSKYVNRLEDLKYEENSEKAVQCLNEMVTNALSHVE

Click here to download the sequence:
Link to NCBI Protein BLAST