Transcript Information: R_Transcript_39606.p1


Annotated TAIR IDAT2G22740.2
Annotated Gene NameSU(VAR)3-9 Homolog 6
Annotated Gene Symbol(s)SUVH6
Annotation TypeOrtholog
Chromosome Positionchr2:9664256-9666628 | Reverse length=790
E-Value2.7E-211
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5645014422565
Replicate 23.3560520145931
Replicate 33.7987197212401
Condition 2: 8 Hour
Replicate 13.9382859705359
Replicate 26.0314066904297
Replicate 36.6005856801407
Condition 3: 24 Hour
Replicate 16.9492663236707
Replicate 24.7371435179562
Replicate 36.1224348774538


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39606.p1 GENE.R_Transcript_39606~~R_Transcript_39606.p1 ORF type:complete len:1001 (+),score=232.63,SAD_SRA|PF02182.13|1.7e+03,SAD_SRA|PF02182.13|2.9e-49,Pre-SET|PF05033.12|1.6e+03,Pre-SET|PF05033.12|1.5e-18,Pre-SET|PF05033.12|5.9e+02,SET|PF00856.24|4.5e+03,SET|PF00856.24|4e-15 R_Transcript_39606:291-3293(+)
ATGGTTGCAGTTATTTGTGAGAAAAGGCGATTGGAAAATGGGGACTCTTCATTAGGGATATGCTTGCCAAAATTTAAGAGGCGTAAGGTCTCTGCAGTTCGTGATTTTCCTCGCGGGTGTGGCCCAAACGTGGCACCTATCAACGTGCAAAAGAAAGAAGTTCAAAGTGGCGAGAATGAGGTGGATTGTTCTCTTAAAGATGTAGAGCCTAGTGGGGGAAAGGGAGATGATCTTCATGATGGCTCACTGGAAGAACTAATAATTGAGGACCCCAATTCATCTCAAGACTTACAGAAGGTGGAGAAGGAATCCATTGTGAAAGACAACACCTGTGGTACTTCAAAAGATTTGTTTAAAGCGAGGGTTGAGTCACCAATTTCTTTGGAGAATACCATAGTACTTGGTTTGAAGAAGGCCGACAATGGTACCACGAGTAAAAATTTGGTTGAGGCTTCTAGTGTGCAGCAGAGCTTGCTACCACATCACCCAATTCCTTCAGGTCTTGTTTGGAAGGAGCAAAAATACCCACCTCGTAGAAGAGTTTCTGCGGTTCGTGATTTTCCCGGTGGGTGTGGGCCTAATGTCCAACAACATTGTGAAGCTCAAGATAGGCTTACTTGTCGAGAGAAAATAGATTATGTACAGAATGATGAACCTCAAAGTGGCCGAGGTTATGAGGCTGACTGTGTTGTTAGAAATACGGAAAAAGGGGCTGTTTCTGGAAAAAGTGGGAATAAACATGAAGATCAACCTGAACCTGATAAAGGTGCTTGTTTCAAGGCGATGGTCCACGTGTCAGAATGCAGCAAACCTTCTAAGATTAAGGGGCAAGTGGAAATGTCCAAACTTGAGAATGCCGAACAACATGAACAATTAATGGAGACCGGCGGATGCCATGGCAGAGATGTCAAGGGTGTGGAAGGTTCAGTGGATGGAACTAACAAAGATATCATTGTTTATGCGAAGGATAAAGATAAGAGAAAAACAATTCGTGCTTCTTTTGGCAATGTTGAGTTGGAAGAAAAGTCAGTGGTTGGCGCTCACATTGAAAAGAACGAGATCATTGTGCAAGGTCTACTGGCTGCACCTAATTGCCCTTGGAGACAAGGCAAAGAAGCAGTTAAATCTAGCCCATCTACAACTAATATTAAGCGAAGCAAGGGAAAGAAAAATGATAATGCTAGACAAGAAAAAGATAAGCCTTTACACAGTAACAGCACTGGCTATACTAAGAATTTGGGAGAAAGATCCAAGATGATAGTACCCTATCTAGCCGAGACAGAAACAGAGGAGGTTCATGTTGGCAGGGATGAAGATGACTCTTCTGAGAATGAGGAAATGTCAAATGATTTTATACTGGCTCCAAGAAAGGGTAGAGGAGAAGTTGTCCTTCTTCCTGTTGGTGTTGGTTCTTCTAGTGAAACAGGCATCCGCAACAAGGTGCGGGAGACTCTTCGATTATTCCAGGGTGTTGTCAGAAAGTTACTGCAAGGAGAAGAAACAAAGACAAAGGATGAAACAAAGTTAAAGGACCCAGATGCTAAAAAGAGGATTGATCTACGTGCTGCAAAGATCCTGAGGGAGCATGGTAGATATATTAATACAGGCAAAAAAGGTTTTTTAGGGGCTATCCCTGGAGTTGAAGTAGGTGACTTTTTTCACTACCGCATGGAGCTCTCACTTATTGGGCTTCATCGCCCGCCTCAAGGTGGTATAGACTATATCAAGCAAGGGAAAAAAATTATTGCAGTTAGCATAGTGGCTTCTGGAGGTTATGCCAATGACGTGGACAGTGCTGATGTATTAATTTATACTGGTCAAGGTGGAAATGCGAAGAGTGCAGATAAGGAGCCTGAAGATCAGAAGCTTGAGCGAGGAAATTTGGCGTTGAAGAATAGCATAGATGAAAAGAATGTTGTTAGGGTAATTCGAGGGTTCAAAGAGGCTAGACCTTCTGAGACAGTTGATGGAAAATCTAAAGTTATTGCGACATATACTTATGACGGATTGTATTCAGTAGAAAAGTACTGGCAAGATCTTGGGCCACATGGAAAGTTGGTTTATAAGTTTGAGTTGAGAAGACTTCAGGGTCAGCCAGAGCTTGCATGGAAGGAAGTGAAAAGGTCCAAGAAATTTAAAGAACGGGAGGGTCATTGTGTTGATGACGTTTCAGGAGGGAAAGAAACATTTCCAATTTGTGCTATCAATACTGTAGATGATGAGAAACCCCCGCCTTTTACATATATTACTTCCATGATGTATCCAAGTTGGTGCCAGCCTATACCCCCCAGGGGCTGTGATTGTAAGGATGAATGTTCAGATTCAGAGCATTGTTCTTGTGCTGTCAAGAATGGTGGTGAGATCCCATACAATTATAATGGGGCTATTGTTGAAGCAAAACCACTTGTATATGAGAGTGGACCTCTCTGTAAGTGCCCTCGATCTTGTCACAATAGAGTCAGCCAGCGTGGTATAACATTTCCTCTCGAGGTTTTCAAGACTGAATCAAGGGGATGGGGTGTGAGATCTCTTTCTTCCATTCCATCCGGTAGCTTCATATGTGAATATATAGGAGAGCTACTGGACGACAAAGAAGCTGAACAAAGAACTGGTAGTGATGAGTATTTATTTGATATTGGTCAAAACTTCAATGATCCTACTCTTTTGGATGGACTTTCAGCTCTCTTGCCTGATGTGGCACCTAGCTCTGGAGATGTGGTGGAAAATGTTGGTTTTACCATTGATGCTTTATATTATGGGAACATTGGGAGGTTTTTCAATCATAGCTGTTCTCCTAACCTCTACGCACAAAATGTGCTCTATGACCACGACGATAAGAGAATACCTCATATAATGCTGTTTGCAGCAGAGAATATTCCTGCTTTGCAGAAGCTGACTTACCATTACAATTACACCATAGACCAGGTTTTTGATTCTGATGGCAATATCAAGAAGAAGAGTTGCTACTGTGGATCGTCAGAGTGCACTGGTCGTATGTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39606.p1 GENE.R_Transcript_39606~~R_Transcript_39606.p1 ORF type:complete len:1001 (+),score=232.63,SAD_SRA|PF02182.13|1.7e+03,SAD_SRA|PF02182.13|2.9e-49,Pre-SET|PF05033.12|1.6e+03,Pre-SET|PF05033.12|1.5e-18,Pre-SET|PF05033.12|5.9e+02,SET|PF00856.24|4.5e+03,SET|PF00856.24|4e-15 R_Transcript_39606:291-3293(+)
MVAVICEKRRLENGDSSLGICLPKFKRRKVSAVRDFPRGCGPNVAPINVQKKEVQSGENEVDCSLKDVEPSGGKGDDLHDGSLEELIIEDPNSSQDLQKVEKESIVKDNTCGTSKDLFKARVESPISLENTIVLGLKKADNGTTSKNLVEASSVQQSLLPHHPIPSGLVWKEQKYPPRRRVSAVRDFPGGCGPNVQQHCEAQDRLTCREKIDYVQNDEPQSGRGYEADCVVRNTEKGAVSGKSGNKHEDQPEPDKGACFKAMVHVSECSKPSKIKGQVEMSKLENAEQHEQLMETGGCHGRDVKGVEGSVDGTNKDIIVYAKDKDKRKTIRASFGNVELEEKSVVGAHIEKNEIIVQGLLAAPNCPWRQGKEAVKSSPSTTNIKRSKGKKNDNARQEKDKPLHSNSTGYTKNLGERSKMIVPYLAETETEEVHVGRDEDDSSENEEMSNDFILAPRKGRGEVVLLPVGVGSSSETGIRNKVRETLRLFQGVVRKLLQGEETKTKDETKLKDPDAKKRIDLRAAKILREHGRYINTGKKGFLGAIPGVEVGDFFHYRMELSLIGLHRPPQGGIDYIKQGKKIIAVSIVASGGYANDVDSADVLIYTGQGGNAKSADKEPEDQKLERGNLALKNSIDEKNVVRVIRGFKEARPSETVDGKSKVIATYTYDGLYSVEKYWQDLGPHGKLVYKFELRRLQGQPELAWKEVKRSKKFKEREGHCVDDVSGGKETFPICAINTVDDEKPPPFTYITSMMYPSWCQPIPPRGCDCKDECSDSEHCSCAVKNGGEIPYNYNGAIVEAKPLVYESGPLCKCPRSCHNRVSQRGITFPLEVFKTESRGWGVRSLSSIPSGSFICEYIGELLDDKEAEQRTGSDEYLFDIGQNFNDPTLLDGLSALLPDVAPSSGDVVENVGFTIDALYYGNIGRFFNHSCSPNLYAQNVLYDHDDKRIPHIMLFAAENIPALQKLTYHYNYTIDQVFDSDGNIKKKSCYCGSSECTGRMY*

Click here to download the sequence:
Link to NCBI Protein BLAST