Transcript Information: R_Transcript_396162.p1


Annotated TAIR IDAT2G02520.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:676771-678145 | Reverse length=211
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.2120994221866
Condition 2: 8 Hour
Replicate 10.22672097173375
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.40532786457217


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_396162.p1 GENE.R_Transcript_396162~~R_Transcript_396162.p1 ORF type:5prime_partial len:108 (+),score=11.91,zf-RVT|PF13966.2|2.5e-05,zf-RVT|PF13966.2|2.1e+02 R_Transcript_396162:2-325(+)
AAAATTAACACAAATGATGTACTCCATCCCACCATGGCTTTGTCGCCAGGTCTTTGTGTGATGTGTGGACGTGATAATGAGAGAGCAGCCTATTTGTTTTTACATTGTACTCGTGCTAGGGATCTTTGGGGTCTTTGGGGAATCCTGGGTGTGTCTGTCCTCTGTGTGGAATTCCTACAAACGCACTTAAGGGGTTTTGGCAGAGACAAGGACAGGACGATGTTGTGGTGTAATGCCTTTTTCACTATTTTGTGGCATATTTGGCTGGAAAAGAATGCAAGGCTATTCACTTCTGCTGATTTGTTGCGGGACAAAATCACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_396162.p1 GENE.R_Transcript_396162~~R_Transcript_396162.p1 ORF type:5prime_partial len:108 (+),score=11.91,zf-RVT|PF13966.2|2.5e-05,zf-RVT|PF13966.2|2.1e+02 R_Transcript_396162:2-325(+)
KINTNDVLHPTMALSPGLCVMCGRDNERAAYLFLHCTRARDLWGLWGILGVSVLCVEFLQTHLRGFGRDKDRTMLWCNAFFTILWHIWLEKNARLFTSADLLRDKIT*

Click here to download the sequence:
Link to NCBI Protein BLAST