Transcript Information: R_Transcript_396258.p1


Annotated TAIR IDAT1G61000.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Kinetochore protein Nuf2 (InterPro:IPR005549); Has 50972 Blast hits to 29793 proteins in 2070 species: Archae - 902; Bacteria - 7404; Metazoa - 23628; Fungi - 4156; Plants - 2312; Viruses - 158; Other Eukaryotes - 12412 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:22471096-22474046 | Reverse length=440
E-Value1E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9031523270323
Replicate 20.49754266389332
Replicate 32.279817485873
Condition 2: 8 Hour
Replicate 10.69628051982688
Replicate 20.52987871661577
Replicate 30.94629249679742
Condition 3: 24 Hour
Replicate 12.1760954718203
Replicate 21.5679093998041
Replicate 31.2447983708188


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_396258.p1 GENE.R_Transcript_396258~~R_Transcript_396258.p1 ORF type:5prime_partial len:211 (-),score=59.30 R_Transcript_396258:349-981(-)
GCCAGGGAAAGGGAGAAACCTCTTGTCCTAGAAGCAGAGGCAAAGGTAAAGGAATTGCGACAAACAATTGATAACCTCAATAGCCTTCAATCGAACTTGAGGAAGGAGCGTCAGTCAATGAAGGAAAAGGCACAAGAAATGCATGCAAATCTTTCTAAAGCAGAGTTTGAACTCATCCAAGCTACAGAAGAAAATGCCATTTTACGTTCTAAAATAGTTCAGTCACCAGACAAACTTCAGAGGACTTTAGAGGAGAAGAAAGTAGTTCAGATGGAGGCAAAGGACTCAGAAAGACTGGCCATGCAAAACTTTCAAGAAAAGACCACCATTTTGGAGGTCTATACTAAGGCATGGGAGAAAATGACAAAGCAGTTGGCTCAGATGCAAGCGATACAAGAACAGGCAAATTCTGCCAAAGCTGTTGAAAAGGATGTTAAGCAACTGAAGACGAAGTTAAGTGATGAGCAAATGCTAGACATATCACTTGAAGCCAAATTAGTTGAATTACAAGCCAAAGCTGAACAGTTAGATGTACACAAAAGTCAGTTAGAGAAGGACGGAAAACTCAGGCGAGAGGAGGATACAAAGGGACTGAACAATGTGAAGTTAAGAGGCAGAATCAAGGAGCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_396258.p1 GENE.R_Transcript_396258~~R_Transcript_396258.p1 ORF type:5prime_partial len:211 (-),score=59.30 R_Transcript_396258:349-981(-)
AREREKPLVLEAEAKVKELRQTIDNLNSLQSNLRKERQSMKEKAQEMHANLSKAEFELIQATEENAILRSKIVQSPDKLQRTLEEKKVVQMEAKDSERLAMQNFQEKTTILEVYTKAWEKMTKQLAQMQAIQEQANSAKAVEKDVKQLKTKLSDEQMLDISLEAKLVELQAKAEQLDVHKSQLEKDGKLRREEDTKGLNNVKLRGRIKEQ*

Click here to download the sequence:
Link to NCBI Protein BLAST