Transcript Information: R_Transcript_39629.p1


Annotated TAIR IDAT5G04885.1
Annotated Gene NameGlycosyl hydrolase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1423369-1426628 | Forward length=665
E-Value2.9E-141
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.3571135580147
Replicate 26.8219026623351
Replicate 38.1041887524294
Condition 2: 8 Hour
Replicate 19.5468354306949
Replicate 214.449811731308
Replicate 39.6983334722645
Condition 3: 24 Hour
Replicate 19.4483394366725
Replicate 25.3346655078292
Replicate 38.9289192405032


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39629.p1 GENE.R_Transcript_39629~~R_Transcript_39629.p1 ORF type:complete len:277 (+),score=35.24,Glyco_hydro_3_C|PF01915.18|6.6e-37 R_Transcript_39629:809-1639(+)
ATGGAGCGTATAGATGACGCTGTGGAGAGGATCTTGCGTGTGAAGTTCACAATGGGTCTTTTTGAAAATCCTATAGCTGATCTTAGCTTACTTAATGAGCTTGGGAGACAGACACACAGAGATTTAGCAAGAGAGGCAGTAAGGAAATCCCTTGTACTGCTGAAAAATGGCGAAGAAGGAGATAATCCAATACTGCCTCTTCCCAAAAGAGGATCAAAGTTACTAGTAGCTGGTACTCATGCTCATAACTTGGGTTATCAATGTGGCGGATGGACGATCAATTGGCAGGGATTCAATGGCAACCAAGACACAAGAGGAACTACGATCCTTAATGCTATAGAAGCCACTATCGACCCAAGCACAGAGGTTGTGTACAAGGAGCACTCAGATGAGGAATTTGTGAAGTCCAACAATTTCACTCATGCCATTGTTGTGGTAGGCGAGGCCCCTTATGCAGAGATGGAAGGAGATAGCCAAACACTCACAATGATAGAACCTGGGCCAAGTGTGATCAACAACGTTTGTGGGGCCATGAAATGTGTTGTTGTTGTCATCTCAGGCCGCCCCATAGTCATAGAGCCCTACATTGCCAGCATCGATGCCTTAGTCGCAGCATGGTTGCCAGGTACAGAGGGACAAGGTATCACAGATGTCCTGTTTGGTGACTACGATTTCACAGGGAAGCTACCAAGAACGTGGTTCAGGACTGTCGATCAACTCCCCATGAATGCTGGCGATACTAACTATGACCCTCTTTTTCCCATAGGATCTTGCCTTACAACCAACCAGATGTGCTTACCAACAACCAAATCAATGGTTCGGTACGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39629.p1 GENE.R_Transcript_39629~~R_Transcript_39629.p1 ORF type:complete len:277 (+),score=35.24,Glyco_hydro_3_C|PF01915.18|6.6e-37 R_Transcript_39629:809-1639(+)
MERIDDAVERILRVKFTMGLFENPIADLSLLNELGRQTHRDLAREAVRKSLVLLKNGEEGDNPILPLPKRGSKLLVAGTHAHNLGYQCGGWTINWQGFNGNQDTRGTTILNAIEATIDPSTEVVYKEHSDEEFVKSNNFTHAIVVVGEAPYAEMEGDSQTLTMIEPGPSVINNVCGAMKCVVVVISGRPIVIEPYIASIDALVAAWLPGTEGQGITDVLFGDYDFTGKLPRTWFRTVDQLPMNAGDTNYDPLFPIGSCLTTNQMCLPTTKSMVRYE*

Click here to download the sequence:
Link to NCBI Protein BLAST