Transcript Information: R_Transcript_39630.p1


Annotated TAIR IDAT5G04885.1
Annotated Gene NameGlycosyl hydrolase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1423369-1426628 | Forward length=665
E-Value2.9E-178
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5654471835748
Replicate 22.7546166726922
Replicate 32.337422203689
Condition 2: 8 Hour
Replicate 16.8531866907742
Replicate 27.4970886639543
Replicate 37.1971400710572
Condition 3: 24 Hour
Replicate 12.7442276861104
Replicate 21.8647303435182
Replicate 32.6163145544105


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39630.p1 GENE.R_Transcript_39630~~R_Transcript_39630.p1 ORF type:internal len:343 (+),score=42.59,Glyco_hydro_3_C|PF01915.18|4.8e+03,Glyco_hydro_3_C|PF01915.18|4.4e-37,Glyco_hydro_3|PF00933.17|1.1e-15 R_Transcript_39630:1-1026(+)
CATCTAATCACTGGATATCTTAAGAACACTCTCCAATTCAAGGGTTTTGTTATCACGGATTGGGAGGCAATTGATAGGATAAACACCCCATATCATGCCAATTACACATATTCTGTCTTGGCTGGGATTCGAGCTGGCATAGACATGGTTATGGTTCCAAATGAATACGTAGAATTCATTAACACTCTCACTAGACTGGTGAAGAAAAACTATATTCGTATGGAGCGTATTGATGACGCTGTTAGAAGGATCTTGCGTGTGAAGTTCACAATGGGTCTTTTTGAAAATCCTATAGCTGATCTTAGCTTACTTAATGAGCTTGGGAGACAGACACACAGAGATTTAGCAAGAGAGGCAGTAAGGAAATCCCTTGTACTGCTGAAGAATGGCAAAGAAGGAGATAATCCAATACTACCCCTTCCCAAAAGAGGATCAAAGTTACTAGTAGCTGGTACTCATGCTCATAACTTGGGTTATCAATGTGGCGGATGGACGATCAATTGGCAGGGATTCAATGGCAACCAAGACACAAGAGGCACTACGATCCTTGATGCTATAGAAGCCACTATTGACCCAAGCACAGAAGTTGTGTACAAAGAACACCCAGATGAGGAATTTGTAAAGTTCAACAATTTCACTCATGCCATTGTTGTGGTAGGCGAGGCCCCTTATGCAGAGATGGAAGGAGATAGCCAAACACTCACAATGATAGAACCTGGGCCAAGTGTGATCAACAACGTTTGTGGGGCCATGAAATGCGTTGTTGTTGTCATATCAGGCCGCCCCATAGTCATGGAGCCCTACATTGCCAGCATTGATGCCTTAGTCGCAGCATGGTTGCCAGGTACAGAGGGACAAGGTGTTACAGATGTCCTGTTTGGTGACTATGATTTCACAGGGAAGCTACCAAGAACGTGGTTCAGGACTGTCGATCAACTCCCCATGAATGCTGGCGATACTAACTATGACCCTCTTTTTCCCATAGGATCTTGCCTTACAACCAACCAGATGTGCTTACCAACAACC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39630.p1 GENE.R_Transcript_39630~~R_Transcript_39630.p1 ORF type:internal len:343 (+),score=42.59,Glyco_hydro_3_C|PF01915.18|4.8e+03,Glyco_hydro_3_C|PF01915.18|4.4e-37,Glyco_hydro_3|PF00933.17|1.1e-15 R_Transcript_39630:1-1026(+)
HLITGYLKNTLQFKGFVITDWEAIDRINTPYHANYTYSVLAGIRAGIDMVMVPNEYVEFINTLTRLVKKNYIRMERIDDAVRRILRVKFTMGLFENPIADLSLLNELGRQTHRDLAREAVRKSLVLLKNGKEGDNPILPLPKRGSKLLVAGTHAHNLGYQCGGWTINWQGFNGNQDTRGTTILDAIEATIDPSTEVVYKEHPDEEFVKFNNFTHAIVVVGEAPYAEMEGDSQTLTMIEPGPSVINNVCGAMKCVVVVISGRPIVMEPYIASIDALVAAWLPGTEGQGVTDVLFGDYDFTGKLPRTWFRTVDQLPMNAGDTNYDPLFPIGSCLTTNQMCLPTT

Click here to download the sequence:
Link to NCBI Protein BLAST