Transcript Information: R_Transcript_39632.p1


Annotated TAIR IDAT5G04885.1
Annotated Gene NameGlycosyl hydrolase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1423369-1426628 | Forward length=665
E-Value5.5E-286
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.681362336465
Replicate 29.6816274141819
Replicate 39.3323745762103
Condition 2: 8 Hour
Replicate 117.321482240459
Replicate 223.147653609672
Replicate 324.000462931401
Condition 3: 24 Hour
Replicate 110.543585541612
Replicate 211.354374021445
Replicate 311.835573645507


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39632.p1 GENE.R_Transcript_39632~~R_Transcript_39632.p1 ORF type:complete len:540 (+),score=109.83,Glyco_hydro_3|PF00933.17|2e-65,Glyco_hydro_3_C|PF01915.18|6.2e-37 R_Transcript_39632:37-1620(+)
ATGTCTACTCGTCTAGGAATACCAATGATTTATGGGATTGATGCTGTTCATGGAAATGCAATTGTCTACAATGCCACAGTTTTCCCCCATAATATTGGTCTTGGAGCTGCTAGGGATCCAGAACTTATGAAAAGGATTGGTGTTGCAACTGCTCTTGAAGTTAGAGCAACAGGGATAACATATGCCTTTGCTCCCTCCATTGCTGTTTCTCGAGATCCAAGATGGGGCCGTTGCTATGAGAGTTACAGCGAGGACCCCAGGATTGTTCAGGAGATGACAGATATTATCTATGGCTTACAAGGAGAAAACCCGGAAAAATCTCAGAATGGCATTCCATATGTCGGAGGAAAGGACAAAGTTGCAGCTTGTGCTAAGCACTTTGTGGGAGATGGTGGGACAATGAAAGGCATTAACGAGGACAACACAGTTATTGATGCTGCTGGGTTGTTCAGAATTCACATGCCTGCTTACATTGACTCCATCAGCAAGGGGGTTTCAACAATTATGGTCTCCTATTCTAGCTGGAATGGGAAAAAGATGCATACAAATCGTGAGCTAGTCACTGAATTTCTCAAGAACACTCTCCAGTTCAAGGGCTTTGTCATCTCAGATTGGGAAGGACTTGATAGGATAACAACTCCCCATCGTGCCAATTATAAACACTCTGTCTTAGCTGCAATCCAAGCTGGTATAGACATGGTTATGGTCCCTCACAAATTTATAGAGTTCATTGACACTCTCACCAGCCTGGTGAAGAACAATGATGTTCCCATGGAACGTATTGATGATGCTGTAGCACGGATCTTGCATGTTAAGTTCATAATGGGTCTCTTTGAAAACCCTATGGCTGACCGTGGTTTACTTAATGAGCTTGGGAGCCGGGTGCACAGAGACTTGGCAAGGGAAGCAGTCAGGAAATCTCTTGTAATGCTCAAGAATGGCAAATATGGAGAAACTCCGCTACTGCCCCTTCCCAAGAGTGGATCAAAGATACTAGTAGCTGGTACCCATGCTCATAATTTGGGTTATCAATGTGGTGGATGGACAATTAAATGGCAGGGATTTCATGGCAACAACGAAACAAGAGGAACTACAATCCTAGAAGCTGCTAAATCCGCTGTTGACTCGAGCACAGAGGTTGTATACAAGGAGCACCCAGATGAAGAATTTGTCAAGTCCAACAATTTCACTCATGCCATAATTGTAGTGGGTGAACTCCCATACGCAGAAACGGAAGGAGATAGCAAAACACTCACAATGATAGAACCTGGGCCAAGTGTGATCAACAACATTTGTGGGGCCACAAAATGTGTCGTTGTTGTCATCTCAGGCCGCCCCATAGTGATGGAGCCCTACATTGCCAGTATTGATGCATTAGTTGCAGCATGGTTGCCAGGTACAGAAGGCCAAGGTGTTACTGATGTCCTGTTTGGTGACTATGACTTCACAGGAAAGCTACCAAGAACATGGTTTAGGACAGTTGATCAACTCCCCATGAATGCTGGGGACAGAAACTATGACCCTCTATTTCCCTTAGGATTTGGCCTTACATATAAGGGCCAAAACTACCCGTCTGGAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39632.p1 GENE.R_Transcript_39632~~R_Transcript_39632.p1 ORF type:complete len:540 (+),score=109.83,Glyco_hydro_3|PF00933.17|2e-65,Glyco_hydro_3_C|PF01915.18|6.2e-37 R_Transcript_39632:37-1620(+)
MSTRLGIPMIYGIDAVHGNAIVYNATVFPHNIGLGAARDPELMKRIGVATALEVRATGITYAFAPSIAVSRDPRWGRCYESYSEDPRIVQEMTDIIYGLQGENPEKSQNGIPYVGGKDKVAACAKHFVGDGGTMKGINEDNTVIDAAGLFRIHMPAYIDSISKGVSTIMVSYSSWNGKKMHTNRELVTEFLKNTLQFKGFVISDWEGLDRITTPHRANYKHSVLAAIQAGIDMVMVPHKFIEFIDTLTSLVKNNDVPMERIDDAVARILHVKFIMGLFENPMADRGLLNELGSRVHRDLAREAVRKSLVMLKNGKYGETPLLPLPKSGSKILVAGTHAHNLGYQCGGWTIKWQGFHGNNETRGTTILEAAKSAVDSSTEVVYKEHPDEEFVKSNNFTHAIIVVGELPYAETEGDSKTLTMIEPGPSVINNICGATKCVVVVISGRPIVMEPYIASIDALVAAWLPGTEGQGVTDVLFGDYDFTGKLPRTWFRTVDQLPMNAGDRNYDPLFPLGFGLTYKGQNYPSGI*

Click here to download the sequence:
Link to NCBI Protein BLAST