Transcript Information: R_Transcript_396350.p1


Annotated TAIR IDAT1G78640.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT2G33720.1); Has 92 Blast hits to 55 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29579715-29581988 | Reverse length=487
E-Value1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.37493393600532
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.20498042167593
Replicate 20.19692195438015
Replicate 30.19542593470444


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_396350.p1 GENE.R_Transcript_396350~~R_Transcript_396350.p1 ORF type:5prime_partial len:112 (+),score=9.21 R_Transcript_396350:1-336(+)
CTGAAACGTAGCGACTATAATGGAGAGCAATGCCGGCTGCTGATGCCTAAGAAGTCAGTCATTAATCATATAATGAATCATCTCGGGGATCAGGACAAGGCCAAAGTTAAAACTGAGGGTTTACCAGTAAGAATCAGAGACTGTGACACAGGACATGAGGTGGAGAACATGATTTTTCAGTACTGGAGTTCTTCTAAGCGTTATGTTCTTATAGGTAACTGGGTTCGTGGCTTCGTTAGACGCAGACAACTTAACAAAGGAATGAGAGTTGGTTTGGCTTGGGATCCACTCAACTATAAGCTGCTCTTCTCTGTTCTAGACCGCAACTTAAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_396350.p1 GENE.R_Transcript_396350~~R_Transcript_396350.p1 ORF type:5prime_partial len:112 (+),score=9.21 R_Transcript_396350:1-336(+)
LKRSDYNGEQCRLLMPKKSVINHIMNHLGDQDKAKVKTEGLPVRIRDCDTGHEVENMIFQYWSSSKRYVLIGNWVRGFVRRRQLNKGMRVGLAWDPLNYKLLFSVLDRNLK*

Click here to download the sequence:
Link to NCBI Protein BLAST