Transcript Information: R_Transcript_396446.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value6E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.099742956036715
Replicate 20.11473388205627
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.12219061115402
Replicate 30.099189129073153
Condition 3: 24 Hour
Replicate 10.25090499702409
Replicate 20.12052054038567
Replicate 30.23920988728849


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_396446.p1 GENE.R_Transcript_396446~~R_Transcript_396446.p1 ORF type:5prime_partial len:183 (+),score=26.38 R_Transcript_396446:2-550(+)
GGTGGAGTTGCAAGGCATATAAAAGAGGAGATCTTGGAAAACTCGGGTTTTGAGGAAGGTACTTTGCCAGTAGGATATCTAGGAGTTCCTCTAGCATCCAAAAGATTAACAGTTCAACAATGCATAGTTTTGGTTGACAAGATGACAACTAAAATCAGATCTTGGGCTGCCAAATTCCTCAGCTATGGTGGCAAGGTAGTCCTTATTAAGGTAGTTCTGTTTGGTATTCAGACTTTTTGGGCACAACTCTTTGTGCTACCTCAGAAGGTAATCAAGCTGGTGGAGGCTATATGTAGAAGCTACCTCTGGAGTGGGGTAGGGGATATCACAAAGAGAGCCTTGGTTGTATGGGAGAAGATCTGTTCACCTAGAAGTGCTGGTGGGATGAATATTCTAAATCTAAGAATTTGGAATAGAGCAGCTATCTGTAAATTGCTATCGAATTTGAGTGAAAAAAAGACAACCTGTGGGTTAAATGGGTTCATGGTTTCTATATTAAATCTTAGAACTTCTGGCAGATGCAAAGCCCTGCTCAAGCATCTTGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_396446.p1 GENE.R_Transcript_396446~~R_Transcript_396446.p1 ORF type:5prime_partial len:183 (+),score=26.38 R_Transcript_396446:2-550(+)
GGVARHIKEEILENSGFEEGTLPVGYLGVPLASKRLTVQQCIVLVDKMTTKIRSWAAKFLSYGGKVVLIKVVLFGIQTFWAQLFVLPQKVIKLVEAICRSYLWSGVGDITKRALVVWEKICSPRSAGGMNILNLRIWNRAAICKLLSNLSEKKTTCGLNGFMVSILNLRTSGRCKALLKHLG*

Click here to download the sequence:
Link to NCBI Protein BLAST