Transcript Information: R_Transcript_396759.p1


Annotated TAIR IDAT2G21090.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:9045695-9047488 | Reverse length=597
E-Value1E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.19087545832998
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.40656148802156
Replicate 30
Condition 3: 24 Hour
Replicate 10.20870733843367
Replicate 20
Replicate 30.19897913351725


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_396759.p1 GENE.R_Transcript_396759~~R_Transcript_396759.p1 ORF type:internal len:110 (+),score=2.63,PPR_2|PF13041.2|5.3e-05,PPR_2|PF13041.2|2.8e-07,PPR|PF01535.16|6.4e+03,PPR|PF01535.16|0.0012,PPR|PF01535.16|6.9e-08,PPR_1|PF12854.3|0.0052,PPR_1|PF12854.3|0.0022,PPR_3|PF13812.2|4.3,PPR_3|PF13812.2|0.00022 R_Transcript_396759:3-329(+)
GAAAAACCCGCCAATTTACGAATGTTAACGAGAACTCTCATCCTTGGAAGTTGGAAACACAGACGCTGGAAGAATTCGATAAAAAGTTTCTCAACCCTTTATCAAAACCCAGCAGGCCAACTATATGATACATTCGCCATCAATACTGAGATAACTAGGTATGCAAAAGAGGGTCAGTTGGAGTTTGCTCGTCAACTGTTCGACGAAATGCCTAAACGAACTGTTGTTACTTGGAACACCATGCTTACAGGGTATTCTAAATGGGGTTCCTACAATGAAGCACTTAGTCTCGTTTATGATATGCATCGTAGCTCCATGAAGCTTAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_396759.p1 GENE.R_Transcript_396759~~R_Transcript_396759.p1 ORF type:internal len:110 (+),score=2.63,PPR_2|PF13041.2|5.3e-05,PPR_2|PF13041.2|2.8e-07,PPR|PF01535.16|6.4e+03,PPR|PF01535.16|0.0012,PPR|PF01535.16|6.9e-08,PPR_1|PF12854.3|0.0052,PPR_1|PF12854.3|0.0022,PPR_3|PF13812.2|4.3,PPR_3|PF13812.2|0.00022 R_Transcript_396759:3-329(+)
EKPANLRMLTRTLILGSWKHRRWKNSIKSFSTLYQNPAGQLYDTFAINTEITRYAKEGQLEFARQLFDEMPKRTVVTWNTMLTGYSKWGSYNEALSLVYDMHRSSMKLN

Click here to download the sequence:
Link to NCBI Protein BLAST