Transcript Information: R_Transcript_39687.p1


Annotated TAIR IDAT3G24820.1
Annotated Gene NameBSD domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9062717-9064366 | Reverse length=186
E-Value3.7E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9143672367245
Replicate 23.5189330306645
Replicate 33.5831768306831
Condition 2: 8 Hour
Replicate 14.92453149777
Replicate 25.9962141250107
Replicate 36.6927726309807
Condition 3: 24 Hour
Replicate 14.4889567205008
Replicate 23.2035571572906
Replicate 34.5242741531575


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39687.p1 GENE.R_Transcript_39687~~R_Transcript_39687.p1 ORF type:complete len:179 (+),score=34.36,BSD|PF03909.13|7.4e-12 R_Transcript_39687:112-648(+)
ATGTATTCATGGCTACGCAGGAGCTTCTCAAGGAGTAAGACCAGCAGCACCAACAACAAAGAGGATAATCAGAACCTGGGAAATTCCCACCAGAAGAAAGCAATTAGCAAAGAAGAAGAAGAAGAATTTTATGGGGTTACAGATCAGTTGGTTGAATTCATAAAGTCCTTCACTATAGATACCTTCAAGAATTGCTCTCTCCCAGATGAGGAAATTGATGGGTCTCAAACGACTTCAGGTGGGGTGAGGGTGGATTTGTCTGAGTGGCAACAACAGCATGCTGTCATTATTCTCTCTAAAGTCAAGGAACTGTCACAATTAAGATACACCTTATGTCCTCGCCACTTGAAGGAACGGCAATTCTGGAGAATATACTTCACACTTGTTAAAAGCTATGTGACTGAGTACGAGCTGCAGGCCATACAACTTGATAAACTCAGAAGGATGGCACTAGGGAACGAGACACGTTCAGATATGAATGGCATTGAGCTTGAAATGACAGAGTCGAAGCAGACATGTAGCGCTGCACTGTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39687.p1 GENE.R_Transcript_39687~~R_Transcript_39687.p1 ORF type:complete len:179 (+),score=34.36,BSD|PF03909.13|7.4e-12 R_Transcript_39687:112-648(+)
MYSWLRRSFSRSKTSSTNNKEDNQNLGNSHQKKAISKEEEEEFYGVTDQLVEFIKSFTIDTFKNCSLPDEEIDGSQTTSGGVRVDLSEWQQQHAVIILSKVKELSQLRYTLCPRHLKERQFWRIYFTLVKSYVTEYELQAIQLDKLRRMALGNETRSDMNGIELEMTESKQTCSAALS*

Click here to download the sequence:
Link to NCBI Protein BLAST