Transcript Information: R_Transcript_396901.p1


Annotated TAIR IDAT5G20000.1
Annotated Gene NameAAA-type ATPase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6756915-6759550 | Forward length=419
E-Value3.8E-208
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.50145497128348
Replicate 20.46145715200655
Replicate 30.062930597791628
Condition 2: 8 Hour
Replicate 10.26907543898072
Replicate 20
Replicate 30.04986706214392
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.12026211366427


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_396901.p1 GENE.R_Transcript_396901~~R_Transcript_396901.p1 ORF type:internal len:364 (+),score=68.29,AAA|PF00004.25|5.1e-42,AAA|PF00004.25|7e+03,AAA_5|PF07728.10|2.6e-06,AAA_16|PF13191.2|1.3e-05,AAA_16|PF13191.2|2.7e+03 R_Transcript_396901:2-1090(+)
TTGAATCTCAAGAGATTAGAGGCACAAAGAAACGAATTGAATACAAAAGTGAGAAAGTTGAGAGAAGAGATTCAACAACTTCAAGAACCTGGATCATATGTTGGCAGAGTGATCAAAGTAATGGGAAGAAAAAAAGTGTTGGTAAAGATACAACCTGATGGAAAATATGTAGTGGATATCGACAAAAAAATTCCAATCAACAAACTTTTGCCTAACACCAGAGTTGCATTGAAGAATGATAACTATCTCCTCCACAAAATCCTTCCAAAAAGCTTTAATGCTCTTGTTTCTTTGATGAAAGTTGAAAAAGTCCCAGATTCTACTTACGATATGATTGGAGGTCTCGACAAACAAATCAAAGAGATCAGAGAGGTCATCGAGCTTCCCATCAAACATCCAGAATTGTTTGAATCATTGGGTATTGCACAACCAAAAGGAGTTTTGTTGTATGGTCCACCAGGAACTGGAAAAACACATGTCGTTAGAGCAGTCGCTCATCACACAAGCTGTACATTCATCAGAGTTTCAGGAAGTGAGTTGGTACAAAAGTACATAGGAGAAGGATCAAGAATGGTGAGAGAATTGTTTGTCATGGCACGTACCATGGCTCCATCCATCATTTTCATGGACGAAATCGATTCTATTGGTTCCACTAGAATAGACTCTAGCAGAGGAGGAGACAGTGAAGTGCAAAGAACAATGTTGGAATTGTTGAATCAGTTGGATGGTTTTGAAGCTTCTCAAAACATCAAAGTCATCATGTGTACCAACAGACTCGACATTCTCGATCCTGCTCTTTTGAGACCAGGAAGAATAGACAGAAAGATTGAATTTCCTAATCCCAACGCAGATGCAAGAAAAGAAATCTTAAAGATTCACTCTCGTAGAATGAATTTGACGAGAGGAATCAACTTGGACAAGATCGCTGGTCAGCTGAATGGTGCTTCTGGAGCAGAAATCAAAGCAGTTTGTACTGAGGCAGGTATGTATGCCATGAGAGAAAGAAGAAGCCACGTAAACCAGGAAGATTTTGAAATGGCAGTTTCCAAAGTCATGACCAAAGACAACAAAGATGTCGATAGATTCTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_396901.p1 GENE.R_Transcript_396901~~R_Transcript_396901.p1 ORF type:internal len:364 (+),score=68.29,AAA|PF00004.25|5.1e-42,AAA|PF00004.25|7e+03,AAA_5|PF07728.10|2.6e-06,AAA_16|PF13191.2|1.3e-05,AAA_16|PF13191.2|2.7e+03 R_Transcript_396901:2-1090(+)
LNLKRLEAQRNELNTKVRKLREEIQQLQEPGSYVGRVIKVMGRKKVLVKIQPDGKYVVDIDKKIPINKLLPNTRVALKNDNYLLHKILPKSFNALVSLMKVEKVPDSTYDMIGGLDKQIKEIREVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTHVVRAVAHHTSCTFIRVSGSELVQKYIGEGSRMVRELFVMARTMAPSIIFMDEIDSIGSTRIDSSRGGDSEVQRTMLELLNQLDGFEASQNIKVIMCTNRLDILDPALLRPGRIDRKIEFPNPNADARKEILKIHSRRMNLTRGINLDKIAGQLNGASGAEIKAVCTEAGMYAMRERRSHVNQEDFEMAVSKVMTKDNKDVDRFF

Click here to download the sequence:
Link to NCBI Protein BLAST