Transcript Information: R_Transcript_397449.p1


Annotated TAIR IDAT1G20010.1
Annotated Gene Nametubulin beta-5 chain
Annotated Gene Symbol(s)TUB5
Annotation TypeOrtholog
Chromosome Positionchr1:6938033-6940481 | Reverse length=449
E-Value4.2E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39680349901563
Replicate 20.91288262679557
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.23790983355323


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_397449.p1 GENE.R_Transcript_397449~~R_Transcript_397449.p1 ORF type:3prime_partial len:92 (+),score=14.84,Tubulin_C|PF03953.13|2.2e-13 R_Transcript_397449:3-275(+)
ATGTTGAACGTCAAACAAAAGAACTCTTTATTCTTTGTTGAATGGATTCCTCACAATATCAAGACCTCTGTCTGTGACATTCCTCCAAAAGACCACACTGTTGCTGTCACTTTTATTGGAAACTCTACCTCTATTCAAGAATTATTCAAGAGAGTCAATGAACAGTTCTCTGTTATGTTTAAGAGAAAGGCCTTTTTACATTGGTATACTGGAGAGGGTATGGACGAAATGGAATTTACTGAAGCTGAATCCAATATGCATGATCTTATCTCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_397449.p1 GENE.R_Transcript_397449~~R_Transcript_397449.p1 ORF type:3prime_partial len:92 (+),score=14.84,Tubulin_C|PF03953.13|2.2e-13 R_Transcript_397449:3-275(+)
MLNVKQKNSLFFVEWIPHNIKTSVCDIPPKDHTVAVTFIGNSTSIQELFKRVNEQFSVMFKRKAFLHWYTGEGMDEMEFTEAESNMHDLIS

Click here to download the sequence:
Link to NCBI Protein BLAST