Transcript Information: R_Transcript_397581.p1


Annotated TAIR IDAT5G46560.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Inner nuclear membrane protein MAN1 (InterPro:IPR018996); Has 58 Blast hits to 58 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 11; Fungi - 15; Plants - 20; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:18888061-18890090 | Forward length=387
E-Value4E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.25296747489516
Replicate 30.55196958063018
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.21869410386008
Condition 3: 24 Hour
Replicate 11.1064003483231
Replicate 20
Replicate 30.2637072853843


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_397581.p1 GENE.R_Transcript_397581~~R_Transcript_397581.p1 ORF type:5prime_partial len:83 (+),score=10.68 R_Transcript_397581:3-251(+)
ATTTGTGCTGTGCTTGCAGGATTGACTTTGCTGGTGTTCAGAATTCGTAGAAGATGGTATTTGACAAATAGAGCTGAACAGCTTTACCATCAGGTTTGTGACATACTCGAAGAGAATGCTTTCATGTCTAAAAGCACGATGAACAGAGAACCCTGGTTAGTTGCCTCTAGGCTACGAGATCACCTACTTTCCCCTATTGATAGAAAGGATTCTCGTCTGTGGAAGATGGTGAGGAGCTGGTTGAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_397581.p1 GENE.R_Transcript_397581~~R_Transcript_397581.p1 ORF type:5prime_partial len:83 (+),score=10.68 R_Transcript_397581:3-251(+)
ICAVLAGLTLLVFRIRRRWYLTNRAEQLYHQVCDILEENAFMSKSTMNREPWLVASRLRDHLLSPIDRKDSRLWKMVRSWLS*

Click here to download the sequence:
Link to NCBI Protein BLAST